Serratia sp. UGAL515B_01: OK023_13120
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Entry
OK023_13120 CDS
T11539
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
seru Serratia sp. UGAL515B_01
Pathway
seru01501
beta-Lactam resistance
seru01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
seru00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OK023_13120
01503 Cationic antimicrobial peptide (CAMP) resistance
OK023_13120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
seru03036
]
OK023_13120
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
seru02000
]
OK023_13120
01504 Antimicrobial resistance genes [BR:
seru01504
]
OK023_13120
Chromosome and associated proteins [BR:
seru03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
OK023_13120
Transporters [BR:
seru02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
OK023_13120
Antimicrobial resistance genes [BR:
seru01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OK023_13120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
YknX_C
Beta-barrel_RND_2
BSH_CusB
HH_EMRA
HH_YBHG
HH_CzcB
HH_AAEA_pHBA
BSH_CzcB
Motif
Other DBs
NCBI-ProteinID:
WON76173
LinkDB
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Position
2914980..2916176
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AA seq
398 aa
AA seq
DB search
MNKNRGVTPLAVVLMLSLGLVLTGCNDKENQQQGAKPPTPTVGVVTLKAESLNITTDLPG
RTSAYRVAEVRPQVSGIILKRNFTEGSDIKAGVSLYQIDPATYQAAYNSAKGELAKAQAA
AEIARLTVNRYKPLLGTNFISKQDFDTAVSTQTQANAAVIAAKAAVETARINLAYTKVTS
PISGRIGKSTVTEGALVTSGQANALATVQQLDPMYVDVTQSSNDFLRLKQELADGTLQQE
NGKAKVKLLLENGQEYAHEGRLEFSDVTVDETTGSITIRAIFPNPNNGLLPGMFVRARLE
EGIRSEALLVPQQGVTRNPRGEATALVVGADDKVELRTLTATQAIGDKWLVTAGLKAGDR
VIVTGLQKVKPGAQVKVQEADSQVSSQPQTASEPAKKS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaacagaggggtaacgcctctggcggtagttctgatgctttcattaggccta
gtgcttacggggtgtaatgacaaagaaaaccagcaacaaggtgccaagccccctactcca
acggtaggtgtggtgacattgaaggctgaatccctcaatattactaccgatcttcctgga
cgtacctctgcttatcgcgttgccgaagttcgccctcaggtaagtggcataatcctgaaa
cgcaactttactgaaggcagcgatatcaaggcgggagtttcactgtatcagatcgatccc
gctacctatcaggcggcttacaacagcgctaaaggtgaactggctaaagcacaagccgcg
gctgaaatcgctcgtctgacggtaaaccgctataagccgttgctgggaaccaattttatc
agtaaacaggacttcgacaccgctgtttctacgcaaacacaggctaatgccgctgttatt
gctgccaaagctgccgtcgaaaccgcacgtatcaatctggcatatacaaaagtaacctca
cctatttctggccgtataggtaaatctacagttaccgaaggagccctagtgacctccggt
caggcaaacgcgctggcaacagtacagcagttagacccgatgtatgtggatgtcacacaa
tccagcaacgattttcttcgtttgaagcaggagctggctgacggcaccctgcaacaggaa
aacggtaaggccaaagtgaagttactgcttgagaatgggcaagaatatgcccatgagggc
aggctagagttctccgacgtcaccgtcgatgagaccactggctctatcactatccgcgca
attttcccaaaccctaacaatggcttacttccaggcatgttcgttcgtgcccgtctggaa
gaaggaattcgcagcgaggcgctgctggttccacaacagggtgtcactcgtaacccccgc
ggtgaagcaaccgcgctggtcgttggtgccgacgataaagtggaactgcgtacgctgact
gctactcaggcaatcggcgataaatggttagtgactgccggactgaaagcgggcgatcgc
gttattgtgaccggcttgcaaaaagtcaaaccgggcgcccaagtcaaggtacaagaggct
gatagccaagtgtctagccaaccacagactgcgtctgaacccgcgaagaagtcttaa
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