KEGG   Suncus etruscus (white-toothed pygmy shrew): 125996221
Entry
125996221         CDS       T09902                                 
Symbol
TNF
Name
(RefSeq) tumor necrosis factor
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr01523  Antifolate resistance
setr04010  MAPK signaling pathway
setr04060  Cytokine-cytokine receptor interaction
setr04061  Viral protein interaction with cytokine and cytokine receptor
setr04064  NF-kappa B signaling pathway
setr04071  Sphingolipid signaling pathway
setr04150  mTOR signaling pathway
setr04210  Apoptosis
setr04217  Necroptosis
setr04350  TGF-beta signaling pathway
setr04380  Osteoclast differentiation
setr04612  Antigen processing and presentation
setr04620  Toll-like receptor signaling pathway
setr04621  NOD-like receptor signaling pathway
setr04622  RIG-I-like receptor signaling pathway
setr04625  C-type lectin receptor signaling pathway
setr04640  Hematopoietic cell lineage
setr04650  Natural killer cell mediated cytotoxicity
setr04657  IL-17 signaling pathway
setr04660  T cell receptor signaling pathway
setr04664  Fc epsilon RI signaling pathway
setr04668  TNF signaling pathway
setr04920  Adipocytokine signaling pathway
setr04930  Type II diabetes mellitus
setr04931  Insulin resistance
setr04932  Non-alcoholic fatty liver disease
setr04933  AGE-RAGE signaling pathway in diabetic complications
setr04936  Alcoholic liver disease
setr04940  Type I diabetes mellitus
setr05010  Alzheimer disease
setr05014  Amyotrophic lateral sclerosis
setr05020  Prion disease
setr05022  Pathways of neurodegeneration - multiple diseases
setr05132  Salmonella infection
setr05133  Pertussis
setr05134  Legionellosis
setr05135  Yersinia infection
setr05140  Leishmaniasis
setr05142  Chagas disease
setr05143  African trypanosomiasis
setr05144  Malaria
setr05145  Toxoplasmosis
setr05146  Amoebiasis
setr05152  Tuberculosis
setr05160  Hepatitis C
setr05161  Hepatitis B
setr05163  Human cytomegalovirus infection
setr05164  Influenza A
setr05165  Human papillomavirus infection
setr05166  Human T-cell leukemia virus 1 infection
setr05168  Herpes simplex virus 1 infection
setr05169  Epstein-Barr virus infection
setr05170  Human immunodeficiency virus 1 infection
setr05171  Coronavirus disease - COVID-19
setr05205  Proteoglycans in cancer
setr05310  Asthma
setr05321  Inflammatory bowel disease
setr05322  Systemic lupus erythematosus
setr05323  Rheumatoid arthritis
setr05330  Allograft rejection
setr05332  Graft-versus-host disease
setr05410  Hypertrophic cardiomyopathy
setr05414  Dilated cardiomyopathy
setr05417  Lipid and atherosclerosis
setr05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:setr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    125996221 (TNF)
   04350 TGF-beta signaling pathway
    125996221 (TNF)
   04064 NF-kappa B signaling pathway
    125996221 (TNF)
   04668 TNF signaling pathway
    125996221 (TNF)
   04071 Sphingolipid signaling pathway
    125996221 (TNF)
   04150 mTOR signaling pathway
    125996221 (TNF)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    125996221 (TNF)
   04061 Viral protein interaction with cytokine and cytokine receptor
    125996221 (TNF)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    125996221 (TNF)
   04217 Necroptosis
    125996221 (TNF)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    125996221 (TNF)
   04620 Toll-like receptor signaling pathway
    125996221 (TNF)
   04621 NOD-like receptor signaling pathway
    125996221 (TNF)
   04622 RIG-I-like receptor signaling pathway
    125996221 (TNF)
   04625 C-type lectin receptor signaling pathway
    125996221 (TNF)
   04650 Natural killer cell mediated cytotoxicity
    125996221 (TNF)
   04612 Antigen processing and presentation
    125996221 (TNF)
   04660 T cell receptor signaling pathway
    125996221 (TNF)
   04657 IL-17 signaling pathway
    125996221 (TNF)
   04664 Fc epsilon RI signaling pathway
    125996221 (TNF)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    125996221 (TNF)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    125996221 (TNF)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    125996221 (TNF)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    125996221 (TNF)
   05170 Human immunodeficiency virus 1 infection
    125996221 (TNF)
   05161 Hepatitis B
    125996221 (TNF)
   05160 Hepatitis C
    125996221 (TNF)
   05171 Coronavirus disease - COVID-19
    125996221 (TNF)
   05164 Influenza A
    125996221 (TNF)
   05168 Herpes simplex virus 1 infection
    125996221 (TNF)
   05163 Human cytomegalovirus infection
    125996221 (TNF)
   05169 Epstein-Barr virus infection
    125996221 (TNF)
   05165 Human papillomavirus infection
    125996221 (TNF)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    125996221 (TNF)
   05135 Yersinia infection
    125996221 (TNF)
   05133 Pertussis
    125996221 (TNF)
   05134 Legionellosis
    125996221 (TNF)
   05152 Tuberculosis
    125996221 (TNF)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    125996221 (TNF)
   05144 Malaria
    125996221 (TNF)
   05145 Toxoplasmosis
    125996221 (TNF)
   05140 Leishmaniasis
    125996221 (TNF)
   05142 Chagas disease
    125996221 (TNF)
   05143 African trypanosomiasis
    125996221 (TNF)
  09163 Immune disease
   05310 Asthma
    125996221 (TNF)
   05322 Systemic lupus erythematosus
    125996221 (TNF)
   05323 Rheumatoid arthritis
    125996221 (TNF)
   05321 Inflammatory bowel disease
    125996221 (TNF)
   05330 Allograft rejection
    125996221 (TNF)
   05332 Graft-versus-host disease
    125996221 (TNF)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    125996221 (TNF)
   05014 Amyotrophic lateral sclerosis
    125996221 (TNF)
   05020 Prion disease
    125996221 (TNF)
   05022 Pathways of neurodegeneration - multiple diseases
    125996221 (TNF)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    125996221 (TNF)
   05418 Fluid shear stress and atherosclerosis
    125996221 (TNF)
   05410 Hypertrophic cardiomyopathy
    125996221 (TNF)
   05414 Dilated cardiomyopathy
    125996221 (TNF)
  09167 Endocrine and metabolic disease
   04930 Type II diabetes mellitus
    125996221 (TNF)
   04940 Type I diabetes mellitus
    125996221 (TNF)
   04936 Alcoholic liver disease
    125996221 (TNF)
   04932 Non-alcoholic fatty liver disease
    125996221 (TNF)
   04931 Insulin resistance
    125996221 (TNF)
   04933 AGE-RAGE signaling pathway in diabetic complications
    125996221 (TNF)
  09176 Drug resistance: antineoplastic
   01523 Antifolate resistance
    125996221 (TNF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:setr04052]
    125996221 (TNF)
   00536 Glycosaminoglycan binding proteins [BR:setr00536]
    125996221 (TNF)
Cytokines and neuropeptides [BR:setr04052]
 Cytokines
  Tumor necrosis fators
   125996221 (TNF)
Glycosaminoglycan binding proteins [BR:setr00536]
 Heparan sulfate / Heparin
  Cytokines
   125996221 (TNF)
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 125996221
NCBI-ProteinID: XP_049621133
LinkDB
Position
18:34580682..34582467
AA seq 231 aa
MSTESMIRDVELAEETLPKKEGGPQGSRKCWCLSLLSFILILGATTLFCLLHFKVIGPQG
EEFQDGFPLINPLAQTLRSSHFPSDKPVAHVVARHIEGQLRWQKASANSLMDNGMELIDN
QLVVPSNGLYLIYSQVLFQGRNCPPRQVILTHSIKRLTASYKEKTELLSATKSPCAKETS
EEANSRPWYEPIYLGGVFHLQKGDRISAEANLPEYLNLAKPHQVYFGIVAL
NT seq 696 nt   +upstreamnt  +downstreamnt
atgagcacagaaagcatgatccgggatgtggaactggcagaggagactctgcccaagaag
gaagggggcccccagggctccagaaagtgctggtgcctcagtctcttgtccttcatcctc
atcttaggagctaccacactcttctgcttgctgcatttcaaagtgatcggccctcaagga
gaagagttccaggatggcttcccgctaattaaccctctggcccagaccctcagatcttct
cattttccaagcgacaagcctgtagcccatgttgtagcacgccacattgaagggcaacta
cggtggcagaaggcatcagccaattcactcatggacaatggcatggagttgatagacaac
cagctggtggtgccttccaacgggctgtaccttatctactcccaggtcctcttccagggt
cgaaactgccctcccaggcaggtgatcctcacccacagcattaagcgcctgactgcctcc
tacaaggaaaagacggaactcctctccgccactaagagcccctgtgccaaggaaacctca
gaggaggcaaattctaggccctggtatgagcccatctatttgggaggagttttccacctg
cagaagggagaccggatcagtgcagaggccaatctgcccgaatacctaaacctggccaag
ccccaccaggtctactttgggatcgtcgccctgtga

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