Suncus etruscus (white-toothed pygmy shrew): 125996531
Help
Entry
125996531 CDS
T09902
Name
(RefSeq) solute carrier family 22 member 1-like
KO
K08198
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04976
Bile secretion
setr05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
125996531
09160 Human Diseases
09161 Cancer: overview
05231 Choline metabolism in cancer
125996531
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
setr02000
]
125996531
Transporters [BR:
setr02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
125996531
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
125996531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar_tr
MFS_1
TRI12
Motif
Other DBs
NCBI-GeneID:
125996531
NCBI-ProteinID:
XP_049621420
LinkDB
All DBs
Position
18:complement(16986876..17005562)
Genome browser
AA seq
559 aa
AA seq
DB search
MPTLDHLLEQVGPFGCFQKQAFASLALLSVNFAPIYVGIVFLGFTPDHYCRRPGVAELST
HCGWSPAQELNFTVPGLGPSGESFPRQCLSYNVDWNSSDLGCVDPLAGLAANQSQLLLGP
CVHGWEYDTPGSTIVTEFNLVCGASWRLDLFQSSVNIGFLLGSLVIGYVADRFGRRFCLL
STSLVAAVSGTLMAVAPNYLSLLLLRLLQGLVSKGSWTAGYTLITEFVGSGYRRNVAILY
QGAFAVGLVLLPGVAYLLPHWRWLQLAVSLPILIVLLLCWPLPESPRWLLSQKRNSQAWK
VLEHIAQKNGKQLPSGLKVLSLDEDSLTTTTTTRQRPSCIDLFRTPHLRRYSLILMYLWF
TCSVLYQGVIMHVGATGAHLHLDFLYSALMEFPASFLILAVVDRVGRRHLLTWSNVLSAA
TCFFMVFVTRDYPWLNTALACVSRMGITIVFELVCLVNAELFPTFIRNLGVMVCSSLSDL
GGIIAPFLVFRLMELWPGLPLFLFAGLGLFAGLLIRLLPETKGAALPETIEDAERLGRKT
KPKENKIYLQVQTSDSSGP
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccctcgaccacctcctggagcaggtgggacctttcggctgcttccagaaacaa
gcctttgcctcactggccctgctctcagtcaactttgctcctatctatgtgggaattgtc
ttcctgggcttcacccctgaccactactgccggcgccctggggtggcggagctgagtacc
cactgtgggtggagcccggcccaggagctcaacttcacggtgcccgggctgggaccctcc
ggggagtccttcccccgccagtgcctcagctacaatgtggactggaacagcagcgacttg
ggttgcgtggacccgctggctggcctggctgccaaccagagccagttgctgctcgggccc
tgtgtgcacggctgggagtatgacacgcctggctcgaccattgtcaccgagtttaacctg
gtatgtggtgcctcctggcgactggatcttttccagtccagtgtgaatataggtttcctc
ctgggttccctagtcatcggctacgtggcagacaggttcggccggaggttctgtctcctt
agcacttccttagtggcagccgtctcaggcacattaatggccgtggcccccaactacctg
tccctcctacttctccgcctgctgcaggggctggtgagcaagggcagctggacggctggc
tacaccctgatcacagaatttgtgggttcgggctaccggaggaacgtggctatcctgtac
cagggggccttcgctgtggggctggtgctgctgcctggagtcgcttacctccttccacac
tggcggtggctgcagctggccgtgtccctacccatcctgatcgtcctgctcctttgctgg
cctctgcctgagtccccacgatggctgctgtcacagaaaagaaactcgcaagcttggaag
gttctggaacacatagcccagaaaaatgggaagcaacttccttcaggcctcaaggtcctc
tccctggacgaagactcactgacgacgacgacgacaacgaggcagaggccatcctgcatt
gatctgtttcggacgccgcatctgcggagatatagcctcatcctcatgtacctgtggttc
acctgctccgtgctgtaccaaggtgtcatcatgcacgtgggggcgacaggcgcccacctg
cacctcgacttcctctactcagcactgatggagtttcctgccagcttcctcatccttgct
gtggtggaccgagtgggccgccgccacctgctgacctggtccaatgtattgtcggccgcc
acctgcttcttcatggtctttgtcacccgtgactacccttggctgaacacggccctggct
tgtgtcagccggatggggatcaccattgtcttcgagctggtgtgcctggtgaatgccgag
ctgtttcctaccttcatcaggaacctgggggtgatggtgtgctcctccttgagtgacctg
gggggcatcattgcccccttcctggtcttcaggctcatggaactctggcctggcttgccc
ctctttctgttcgctggcttgggcctgtttgctgggctcctgatccggcttctacctgag
accaagggagcagccctgcctgagaccattgaggatgctgagcgcctggggaggaaaaca
aagcccaaagaaaacaaaatctacctgcaggtccagacctcagactcatcaggcccctga
DBGET
integrated database retrieval system
