Suncus etruscus (white-toothed pygmy shrew): 125997252
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Entry
125997252 CDS
T09902
Symbol
AP4B1
Name
(RefSeq) AP-4 complex subunit beta-1
KO
K12401
AP-4 complex subunit beta-1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
125997252 (AP4B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
125997252 (AP4B1)
Membrane trafficking [BR:
setr04131
]
Endosome - Golgi transport
Others
AP-4 complex
125997252 (AP4B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT
HEAT_2
HEAT_MROH2B_C
PDS5
XMAP215_CLASP_TOG
Motif
Other DBs
NCBI-GeneID:
125997252
NCBI-ProteinID:
XP_049621648
LinkDB
All DBs
Position
19:10212275..10230023
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AA seq
739 aa
AA seq
DB search
MPYLGSEDAVKELQKALCNPHVQADRLRYRNVIQRVIRHMTQGLDMSPVFMEMVKASATI
DIVQKKLVYLYMCSYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRMPGVQEY
IQQPILNGLRDKASYVRRVAVLGCAKMHNLHEDSEVDGALVNELYSLLRDQDPIVVVNCL
RSLEEILKQEGGVVINKPIAHHLLNRMPKLDQWGQTEVLRFLLRYQPRSDEELFDILNLM
DGFLKSSSPSVVMAATKLFLILAQKFPHVQTDVLVRIKGPLLAACSSESRELCFAALCHV
RQILKSLPGHFSSHYQKFFCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVS
VDFAQAAIFAIGGIARTYTDQCVQILTELLGLRQEHITTAVVQTFRDLVWLCPQCTEAVC
QALPGCEENIQDSEGKQALVWLLGVHGERIPNAPYVLEDFVENVKSETFPAVKMELLTAL
LRLFLSRPAECQDMLGRLLHYCIEEEKDMAVRDRGLFYYRLLLAGIDEVKHILCSPKSDP
SLRLLEDQAERPVNSWASDFNTLVPVYGKAHWATISKCQGSEHHGPDNANSSAVSTSGPL
VLEENQERTQQLQDSGGLVLVPNCQITAESFEKTWLSLEVAQQQVFPWQGVIQPDALQVG
LQVVNIQTIAMSRPGAQPWKAYLSAQDETGCLFLTELLVDLENSEVQASVKQSEAQTETL
SSFMSVLQMVIGTVGDIKS
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgccctacctgggctccgaggacgcggtgaaggagctgcagaaggcgctgtgcaacccg
cacgtccaggccgaccggctgcgctaccgcaacgtcatccagcgcgtgattagacacatg
actcagggtctggacatgtctcccgttttcatggagatggtgaaggccagcgccaccatc
gacattgtgcagaagaagttggtgtacctgtatatgtgctcatatgcccccctgaagcca
gacctggccctcctggccatcaacacactgtgcaaagactgctcagatcccaaccctatg
gttcgaggactggcactacggagcatgtgcagcctcaggatgcctggtgtacaggaatac
atccaacagcccattctcaatggtctgcgggacaaggcttcatatgtgaggagagtggcc
gttcttggatgtgccaagatgcataatcttcatgaagactctgaagtggatggtgccctg
gtgaacgaattatacagcctgttgcgtgaccaggatccaatcgtggttgtgaactgcttg
aggtctctggaggaaattctgaaacaggaaggaggtgttgtcatcaataaacccattgcc
caccatctcttaaatcggatgccaaaattggaccagtggggccagactgaagttttgcgc
tttctgctgcgctaccaaccccgcagtgatgaggagcttttcgacatcctcaatctgatg
gacggctttctcaagagcagtagccccagcgtggtgatggcggccacgaaactctttctg
atcctggcgcagaagttcccccatgtccaaacagatgtgctggtacggatcaaggggccc
ttgctggcggcctgttcttcagagagccgtgagctctgcttcgccgccctctgccatgtg
cgtcagatcctgaagagtctgcctggccacttcagcagccactaccagaagtttttctgc
tcctactcggagccccactacatcaagctccagaaggtggaggtgctgtgtgagctggtg
aatgatgagaatgtgcaacaggtcctggaagagcttcgaggatactgcactgacgtgtct
gttgattttgcccaggcggccatctttgccataggtggcatcgccaggacctacacagat
cagtgtgtacaaatcctcacagagttgctggggcttcgacaagagcacatcaccacagct
gtggtgcaaactttccgagacctggtctggctgtgtcctcagtgtacagaagctgtgtgt
caggccctgcctggctgcgaggagaacattcaagatagtgaggggaagcaagcgctggtt
tggctcctgggggtccacggggaaagaattcccaatgcgccttatgtgttggaagacttt
gtggagaacgtgaagtccgagacgtttccagctgtcaagatggagctcctcacggccctg
ctgcgccttttcctctcccggcctgcggagtgccaggacatgctgggtcgcttgttgcat
tactgcattgaggaggagaaagacatggctgttcgagaccgagggctcttctattatcgc
cttctcttggctggcatcgatgaagtaaagcacatcctgtgtagccctaaatccgaccct
tctcttcgacttttggaggatcaggcagaaagacccgtgaacagctgggcctcagacttc
aatacactggtacccgtgtatggcaaagcccactgggcaaccatctccaagtgccagggg
tcagagcatcatggcccagataatgccaactcctcagctgttagcacatcaggacccctg
gttcttgaagagaaccaggagaggacgcaacaactccaggactctggaggcctcgtgctt
gttcccaattgccagattactgctgagtcctttgagaaaacatggttaagtctggaagtt
gcacagcagcaagtgttcccttggcagggagtcattcaacccgacgccctgcaggtgggc
ctgcaagttgtgaacatccagaccatcgcgatgagcaggcccggtgcacagccatggaag
gcctacctcagtgcacaggacgaaactggctgtctgttcctgacagaactcttggtggac
ctcgagaactcagaagtgcaggcctcggtgaaacaaagtgaggctcagactgagaccctg
agcagtttcatgtcggtcttacagatggtgatcggaaccgtgggagacataaagtcataa
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