Suncus etruscus (white-toothed pygmy shrew): 125997482
Help
Entry
125997482 CDS
T09902
Symbol
HMGCS2
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, mitochondrial
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr00280
Valine, leucine and isoleucine degradation
setr00650
Butanoate metabolism
setr00900
Terpenoid backbone biosynthesis
setr01100
Metabolic pathways
setr03320
PPAR signaling pathway
Module
setr_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
125997482 (HMGCS2)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
125997482 (HMGCS2)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
125997482 (HMGCS2)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
125997482 (HMGCS2)
Enzymes [BR:
setr01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
125997482 (HMGCS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
125997482
NCBI-ProteinID:
XP_049621881
LinkDB
All DBs
Position
19:3869846..3887935
Genome browser
AA seq
508 aa
AA seq
DB search
MQRLLTPVKKVLQVKRVIHEASLMPARLLLAAHQKFSTVPAAPLAKRDTWPKDVGIVALE
VYFPAQYVDQTDLEKYNKVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRLMERIQLP
WDAIGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWM
ESSSWDGRYALVVCGDIAVYPNGTARPTGGAGAVAMLIGPEAPLALERGLRGTHMENVYD
FYKPDGSTEYPMLDGKLSMHCYSKALDRCYAYYRQKIQKQWKQAGIDRPFTLDDLQFMIF
HTPFCKMVQKSLARLMLNDFLSASSDNQASRYKGLEAFRGLKIEDTYTNRDLEKVLAKVS
LDTFNKKTKASLYLSTNNGNMYTSSLYGCLASLLSQHSAKELAGSRIGAFSYGSGLAASF
FSFQVSQDASPGSLLDKLVSSVSDLPQRLDSRKRMSPEQFTEIMEQREHFFHKVNFSPPG
DINSLFPGTWYLERIDELFRRKYARRSL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgattattgacgccggtgaagaaggtcttgcaggtaaagcgagtgatacatgaa
gcctcgctcatgcctgctcgcctgctcctagcagctcaccaaaagttttctacagttcct
gctgctcctttggccaaaagggatacttggccaaaggatgtgggcatcgttgctctggaa
gtctatttcccagcccagtatgtggatcaaactgacttggagaagtataacaaagtggaa
gcagggaaatacacagtgggattgggccagacaaggatgggcttctgctcagtccaagag
gacatcaactcattgtgtctgacagtagtccagcggctgatggagcgcatccagctccca
tgggatgctataggccggctagaggtgggcacggaaaccatcatagacaagtccaaagct
gtgaaaacagtgctcatggaactcttccaggattctggcaatactgacattgaaggtata
gatactaccaatgcttgctacggtggcactgcttctctcttcaatgctgccaactggatg
gaatcaagttcctgggacggtcgctatgccttggtggtctgtggtgatatcgcagtctat
cccaatggtaccgctcgtcccacaggtggtgcaggagctgtggctatgttgattgggccc
gaggctcctctggcccttgagagagggcttagaggaactcacatggagaatgtgtatgac
ttctacaaaccagatgggagtacagaatacccaatgctcgatgggaagctttccatgcat
tgctactcaaaggccttggaccgatgttacgcatattaccgccagaaaattcagaaacag
tggaagcaagctggcatcgatcgacctttcacccttgatgatttacagtttatgatcttt
cacacacccttctgcaaaatggtccaaaaatccctggctcgcctaatgctcaatgacttc
ctgtcagccagcagtgacaatcaggccagccgctataaggggttggaggccttcaggggg
ctcaaaatagaggacacctacaccaacagggacctggagaaagtattagcaaaggtctct
ttggacacattcaacaagaaaacgaaggcttctctttacctgtccacgaacaatgggaat
atgtacacctcatctctgtatggttgtctagcttctcttctgtcccaacattctgccaaa
gagttggctggttccaggattggtgccttctcttacggctctggtttggcagcaagtttt
ttttcattccaagtgtcccaggatgcttctccaggctccctcttggataagctagtgtct
agtgtatcagacctaccacaacgactggactcccggaagcgtatgtctcctgaacaattc
acagaaataatggagcaaagggaacattttttccacaaggtgaatttttctccacctggt
gacataaacagccttttcccaggcacttggtatttggagagaatagatgagctatttcgc
cgaaaatatgcccggcgttctctctaa
DBGET
integrated database retrieval system
