Suncus etruscus (white-toothed pygmy shrew): 125997533
Help
Entry
125997533 CDS
T09902
Symbol
SETDB1
Name
(RefSeq) LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETDB1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr00310
Lysine degradation
setr01100
Metabolic pathways
setr04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
125997533 (SETDB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
125997533 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
setr03036
]
125997533 (SETDB1)
Enzymes [BR:
setr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
125997533 (SETDB1)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
125997533 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
125997533 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
MBD
SET
Pre-SET
Chromo_MORC2_6th
Chromo
DUF4537
Motif
Other DBs
NCBI-GeneID:
125997533
NCBI-ProteinID:
XP_049621929
LinkDB
All DBs
Position
19:884899..936762
Genome browser
AA seq
1307 aa
AA seq
DB search
MSAGPECFDPGAARGSPELEEMEVLQQAVVDELGISMEDLRLVIDEELEKMEWVQRRKKQ
LEELEMWVIQKEMEVARVDRLFDDASEAVINCESLVKDFYSKIGLQYRESSSDDEESGPT
EIIEIPDEDDDVLSIDSGDNGSRTPKDQKLREAMAALRRSAQDVQKFMDAVNKKSNSQDL
HKGTLNQMTGELSKDGDLVVGMRILGKKRTKTWHKGTLIAIQMVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPLAEKLYVGSRVVARYKDGNQVWLYAGIVAETPNIKNKLRFLIFFDDG
YASYVTQPELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTGPGSQFKLVESPQPTAPLAPAALLTLATPPAAPPPPQSQE
GDNESLESQLAQSRKQVAKKSTSFRPGSVGSGHSSPPSPALSENILGGKPGISQTYRSPL
GTAPSIPAIPAPAAPTVPGGPPGILGTLAAPAFHGMLDRAPSEPPYRAPMEKLFYLPHVC
SYTCLSRIRPMRKEQYRGKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRSM
QEIERYLFETGCDFLFLEMFCLDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEID
STPPPQVAYSKERIPGKGVFINTGPEFLVGCDCKDGCRDKSKCACHQLTVQATACTPGGQ
VNPNSGYQYKRLEECLPTGVYECNKRCNCDPNICTNRLVQHGLQVRLQLFKTQNKGWGIR
CLDDIAKGSFVCIYAGKILTDDFADKEGPGNGGDEYFANLDHIESVENFKEGYESDAPCS
SDSSGVDLKDQEDGNSGTEDPEESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKEN
GSSETMSKDSRPPDLGPPHIPIPSAVPAGGCKPPSSEDTPKNKVASWLSCNNVSESGFGD
SDSRSSFKTSEGGGGKGEAEKVFKDDGDLKPFKKEVSQQTPDDRSKMSLVTENSRNYGYN
PAPLKTEGLRRPPSKTSLHQSRRLLASARSHPDDVLTLSSSTESEGESGTSRKQITGQTS
ATAVDSDDIQTISSGSEGEDFEDKKNMSGQTKRQVAVKSTRGFALKSTHGIAIKSTNLAS
AEKGESTPVRKNTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRF
PWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccggacccgagtgcttcgaccccggcgctgccaggggctcccctgagctggaa
gagatggaagtgctgcagcaggccgtggtggatgagctgggcatctccatggaggacctg
cggctggtcatcgacgaggagctggagaagatggagtgggtgcagcggcgcaagaagcag
ctggaggagctggagatgtgggtcatccagaaggagatggaagtggcccgggtggaccgg
ctcttcgacgacgcctccgaggccgtgatcaactgtgagtccctggtgaaggacttctac
tccaaaattggactacagtaccgggagagtagttctgacgatgaagagtccgggcctaca
gaaatcattgagattcctgatgaagatgatgatgtcctcagtattgattcaggtgataat
gggagtcgaactccaaaggaccagaagctccgtgaagctatggctgccttacgaaggtcg
gctcaagatgtccagaaattcatggatgctgttaacaagaagagcaattcccaggatcta
cataaagggaccttgaatcaaatgactggagaattgagcaaagatggcgacctggtagtc
ggcatgcgtattctgggcaagaagagaactaagacctggcacaaaggcaccctgattgcc
atccagatggttgggccaggaaagaaatacaaggtgaaatttgacaacaaaggaaagagt
ctattatcgggaaaccatatcgcttatgactaccatcctctcgctgaaaagctgtatgtg
ggcagtcgagtagtggccagatacaaagatggcaatcaggtctggctctatgctggcatc
gtagcggaaacaccaaacatcaaaaacaagctcaggtttctcattttctttgacgatggc
tatgcttcttacgtcacacagccagaactgtaccccatttgccgtccattgaagaagacg
tgggaggacatcgaagacatctcctgcagagacttcatcgaggagtacatcaccgcctac
cctaaccggcccatggtgctgctcaagagcgggcagctcatcaagaccgagtgggagggc
acctggtggaagtcccgcgtggaggaagtggacggaagcctggtccggatcctcttcctg
gatgacaaaaggtgtgagtggatctatcgaggctctacacgtctagaacccatgttcagc
atgaagacatcatcggcttctgccctagagaagaagcaaggggggcagctcaggacacgt
ccaaatatgggtgctgtgaggagcaaaggccctgtggtacaatatacccaagaccttact
ggtcctggctctcagttcaagctagtggagtccccacagcccacagctccacttgccccg
gcggccttgctcactctagccactccaccggccgcaccgccaccacctcagtcccaagaa
ggtgacaatgaatccttggaaagccaacttgcccaatcacggaagcaggtagcgaaaaag
agcacgtcgttccggccaggatctgtgggctctggtcactcctcccctccttctcctgca
ctcagtgagaacatccttggtgggaaacctgggatcagtcagacatacaggtcacctctt
ggcaccgcaccttctatcccagcaatccccgccccggcagcacctacagtccctggaggc
cccccagggatactaggaactctcgcagcccctgccttccatggcatgttggaccgggcc
ccctccgagcccccctaccgggcccccatggagaaactcttctacttacctcacgtctgc
agctacacttgcctgtctcgaatccgccccatgaggaaggagcagtaccggggcaagaac
cccctgctggtccccctgctctatgacttccggcggatgacagcgaggcgccgcgtgaac
cgcaagatgggcttccacgtcatctacaagaccccctgcggcctctgcctccggtccatg
caggagatcgagcgctacctcttcgagaccggctgtgacttcctcttcctggagatgttc
tgcctggacccctatgtcctggtcgaccgcaagtttcagccctataagcctttctactac
attctggacatcacttacggaaaggaagatgtccccctgtcctgcgtcaacgagatcgac
tccacgcccccgccccaagtggcctacagcaaggagcgcattcccggcaagggcgttttc
atcaacacgggccccgagtttctggtgggctgtgactgcaaagacgggtgccgcgacaag
tccaaatgtgcctgccaccagctaactgtccaggctacagcctgcaccccggggggccaa
gttaaccccaattctggttaccaatacaagagactggaagagtgtctgccgacaggagtt
tatgagtgcaacaagcgctgcaactgcgatccaaacatatgcacaaaccgactggtgcag
catggactgcaggtccggctgcagctgttcaagacgcagaacaagggctgggggatccgc
tgcctggatgacatcgcgaaaggctcctttgtctgtatttatgcaggtaaaatcctcacg
gatgactttgctgacaaggaggggcctggaaatggaggtgatgaatacttcgccaacctg
gaccatatcgagagcgtagagaacttcaaggaaggctacgagagcgatgccccctgctcc
tcggacagcagcggggtcgacttaaaggaccaggaggatggcaatagtggcacggaggat
cccgaagagtccaacgatgatagctcagatgataacttctgtaaggacgaagatttcagc
accagctcggtgtggcgcagctacgccacccggcgccagacccgaggccagaaggaaaac
ggatcgtcagagacgatgtccaaggactcccgtcccccagaccttggtcccccgcatatc
cccatcccttccgcagttcctgcaggtggctgcaagccaccttcttccgaagacactccg
aagaacaaggtggcctcgtggctgagctgcaacaatgtcagtgaaagtggcttcggtgac
tctgacagccggtcatcctttaagaccagtgaaggcgggggaggtaaaggggaggcagag
aaagtcttcaaggatgacggagacctcaagccattcaagaaagaggtaagccagcagacc
cccgatgaccgaagcaagatgtctttagttactgagaactctagaaattatggttataat
cctgctccgctgaagaccgaaggactgcgccgtccacctagtaagacgagcctgcaccag
agccgaaggctcctggcctctgctcggtctcacccagatgacgttctgacactttccagc
agcacagaaagtgagggtgagagtggaaccagccgaaaacagattactggccagacctca
gccactgcggtggacagcgatgacatccagaccatctcctctgggtccgaaggggaggac
tttgaggacaagaagaacatgtccggccagacaaagcgccaagtggcggtgaagtcaacc
cggggtttcgctctgaagtcaacccacgggatcgccatcaaatcaaccaacctggcatct
gcggagaagggggagagcacccctgttcgcaagaacacgcgccagttctacgacggcgag
gaatcttgctacatcatcgacgccaagcttgagggcaacctgggccgctacctcaaccat
agttgcagccctaacctgtttgtccagaacgtcttcgtggatacccatgatcttcgcttc
ccctgggtggccttctttgccagcaagagaattcgagctggcacagaacttacgtgggac
tacaactacgaggtgggcagtgtggagggcaaggagctgctctgctgctgtggggccatc
gagtgcagaggacggcttctctag
DBGET
integrated database retrieval system
