Suncus etruscus (white-toothed pygmy shrew): 125998820
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Entry
125998820 CDS
T09902
Name
(RefSeq) LOW QUALITY PROTEIN: F-box/WD repeat-containing protein 7-like
KO
K10260
F-box and WD-40 domain protein 7
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125998820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
125998820
04121 Ubiquitin system [BR:
setr04121
]
125998820
Membrane trafficking [BR:
setr04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
125998820
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125998820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_SCAP
WDR55
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_EML
F-box-like
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_Nup120_160
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
F-box
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
WD40_like
PQQ_2
Beta-prop_IFT140_2nd
Beta-prop_WDR19_2nd
Nop14
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
125998820
NCBI-ProteinID:
XP_049622838
LinkDB
All DBs
Position
X:35578723..35580846
Genome browser
AA seq
702 aa
AA seq
DB search
MNXELLSVGSKRWQTGVSVRGNPSSSQANMEQMNRVVEEEQQQQPRQEEEHTARNSEFVG
EEHRAGEQNSSQQVQQKEINNLFISVDEDSSANQEEKEEDEEHASEQDEEDEEEEEMGQE
SEDFDQSDDSSGDDECTHSNSVTYSSNIVDLTIQHSPPFYTKTTKMKRQLDHESEVCYFP
LGKKLCKESEYTSTSGILPFSATPTTFRDLRAANGQGQKRCWITSVQPPTGLQEWLIMFQ
SWSGPEKLLALDKLIYSCEPTQVNHVMEVIGPQFQKDFISLLPTELALYVLSFLEPRDLL
QTAQVCRCWRILAEDNLLWREKCKEEGIDEPLDVKRRQPGFIHSPWKNAYIRELIIDTNW
RRGELKSPKEMKGHDYHVIPCLQYCGNWIVSGSDDGTLKVWSAVTGTYLRTLVGHEGGIW
SSQMRGNVIISGSTDRTIKVWNVETGECIHTLYGHMSTVRCMHLHEKRLVSGSRDTTIRV
WDIETGLSLRILIGHIAAVHCVQYDGRRVVSGSYDCTVKVWDPETETCLHTLQGHTNRVY
AVQFDGIHVVSASFDTSIRVWDVETGNCIHTMRGHQSLTGGMELKDNILFSWNADTTVKI
WDIKTGQCLETLKGPNKHENVVTCLQLIKNFVITSSADGTVKLWDLKTGEFIRNLVTLPN
REIGGMVWLIRASNTKLVCAVGSQNGTVESKLLMLDFDVDMM
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaattaggaactgctctctgtaggcagcaaaagatggcaaactggtgtctctgtgcga
ggtaacccttcctcaagccaggccaatatggagcagatgaatcgtgtggtcgaagaggaa
cagcagcagcagcctagacaagaggaggaacacactgcacggaacagcgaatttgtcgga
gaagaacatcgagctggggagcagaatagttcccagcaagttcagcagaaagaaatcaac
aatctatttatttcggtagatgaggactcctcagcaaaccaggaagagaaagaggaagat
gaagaacatgctagtgaacaagatgaggaggatgaagaagaggaagaaatgggccaagag
agtgaggattttgatcagtctgatgacagtagtggggatgatgaatgcacacacagtaac
agtgtcacatactccagtaatattgtggacctgactattcaacactctcctccattctat
acaaagacaacaaaaatgaaaagacagttggaccatgagtctgaggtctgctattttcct
ttgggaaagaaattgtgcaaagagtcagaatatacaagtacctctggaattttaccattt
tcagcaacaccaacaactttcagagacctgagagcagccaatggccaagggcagaagcga
tgctggattacatctgtacaaccaccaacaggcctgcaggaatggctgataatgtttcag
agctggagtggaccagaaaaattgctggctttagataagttaatttatagttgtgaacca
acccaagtaaatcatgtgatggaagtgataggaccccagtttcaaaaggactttatttcc
ttgctacctacagagttggcactttatgtactttcattcttggaacccagagatctgcta
cagacggctcaggtctgccgctgctggagaattttggctgaagacaaccttctctggaga
gagaaatgcaaagaggagggtattgacgagccactggatgtcaagagaagacaaccaggc
ttcattcacagtccatggaaaaatgcatacatcagagagctcataattgatactaactgg
aggcgaggagagctcaaatcacccaaggagatgaaaggacatgattatcacgtcatccca
tgcttgcagtactgtggtaactggatagttagtggttctgatgatggcactttaaaagtc
tggtcagcagtcacaggcacatatttgaggacattggtggggcatgaaggaggcatttgg
tcatcacagatgagaggcaatgtcatcattagtggctctacagaccggacgatcaaagtg
tggaatgtggagacaggagaatgtatacacaccctctatgggcacatgtccactgtgcgc
tgcatgcacctccatgagaaaagacttgtgagtggctctcgagacaccactattcgggtc
tgggacattgagacaggcctgtctttacgtattttgataggtcacatagctgccgtccat
tgtgttcagtatgatggcaggagggttgttagtggatcatatgactgcacggtgaaggtg
tgggatccagaaaccgagacttgtctacacacactgcaaggacatactaatagagtctat
gcagtacagtttgacggcatccatgtggtgagtgcctcttttgatacatcaattcgagtt
tgggatgtggagactgggaactgcattcacacgatgagaggccaccaatcattgactggt
gggatggagctcaaggacaatattctcttctcttggaatgctgacaccacagttaaaatc
tgggatatcaagacaggacagtgtttagaaaccttaaaaggtcccaacaagcatgagaat
gttgtgacctgtttacagctcatcaagaactttgttattaccagctcagctgatggaacc
gtaaaactctgggacttgaaaacgggtgaatttatccggaatctcgtcaccttgccgaac
agagaaataggtggcatggtgtggctgattcgagcctccaatacgaagcttgtgtgtgct
gttggaagtcagaatggcactgtggaatccaagttgctgatgttggactttgatgtggac
atgatgtga
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