Suncus etruscus (white-toothed pygmy shrew): 125999493
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Entry
125999493 CDS
T09902
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TTC3-like
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
125999493
Enzymes [BR:
setr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125999493
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125999493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
wHTH_TTC3
TTC3_9th
TPR_1
zf-RING_2
zf-C3HC4_2
TPR_2
zf-rbx1
TPR_8
zf-RING_UBOX
zf-C3HC4
TPR_12
TPR_17
zf-RING_11
zf-RING_Vps41
C1_1
TPR_16
CARD
zf-ANAPC11
TPR_11
zf-RING-like
ANAPC3
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
125999493
NCBI-ProteinID:
XP_049623509
LinkDB
All DBs
Position
X:131532104..131539484
Genome browser
AA seq
1926 aa
AA seq
DB search
MQSKGYVQRERNLEYDICNMWCSKPISVLQDYCAAIKVHIFWPLLFQNENSSILLQTQPR
VEPRGSQAPEMSLKKLQHIELMEEIVDLIKRVVNDPFFIGSLLRIGYKIENKILTMEEAL
NWVKYTGDMTILPKLGAIDNCWPMLSLFFTEYKYHITKVVTENYDLLEDFRTQSCPECIE
QGEVMKLKGNEAFSKERFDMAIIYYTRAIEYSPENHLLYGNRALCFLCTGQFRNALGDGK
RATILKSSWTKGHYRYCDALSMLGELDWALQANIKAQKLCRNDPEGIKDLIQQELKLQKQ
IEDLQGQTLTRNPIKASYKSRAYVSTLSAPAFRASLNFADSGKDSRKTNPRMASGGYHNM
RMGNDSLKPNDCGCHPDFGQASGQTSKHKGKQKSRNNELEKLSASNSQTTLPMDLKNILE
KQFSKSSRDAHQDFANIMKMLRSLIQDGYTALMEQRCQNAAQAFTDLLNGLDPQKIKQLN
LTMINYVLVIYGLAISLLGIGQPEELSEAENQFKRMIEHYPSEGLDCLAYCGIGKVYLKK
NRFLEALNHFEKARTLICRLPRVLTWPTSNVVIEETRPGKIKLLLEKFIEECKFPPVPDA
ICCYQQCRGYSKIQIYVTDPDFKGFIRISCCQYCKIEFHMNCWKKLKTTTFNDKIDKDFL
QGICLTPDCEGIISKIIIYSSSGQVKCEFEHKVIKEKVSPRPILKQKCSSLEKLKLKEDK
KLKRKIQKKEAKKLAQERMEEDLRESNPPKQEEKKETTNKAQKCQFLDDRILQCIKQYSE
KIKSGIQNPTKLLKELLSWKVLSTEDYTTCFSSRNFVNEAVDYVIRHLVQENNRVKTRIF
LHVLSELKEVEPKLATWIQKLNGFGLDATGPFLLRYGASLKELDFSIMTFLWNEKYGHKL
ASIEGKQLDYFCEPASSEEARYLIWLLEEHREKFPALHNALDEFFDVMDSRCTVLRKQDS
GDVPLSSPKIKHKGKKRKLKDSKPILVGSGAASVTTNNDTVNSGEDHKSTSSSLGPFVVP
EHLRQDVEEFEALYEQHNSSEYVVHNKKLLDVNPKQKGSTLYDYFSQLLEKHSPLDMSNK
MFSEEYEFFPEETRQILEKVGDLKTFLLACPRFELIDNCIALKKVTSRHKKKRKKKNIKV
KVEEITAKSGEYLRAELPLNPAAREFKPDVKPKSRAPASAPAAIKPPRAAPANASPPKPA
PEVAPKPKSPKAASGPASGSLPEAAPPKVGVSPESPLPSAEDPGHQHVSCPSMQGSEAVM
PTYWAQPQMVTGYCTYLPYQGYGIAQMPPTYINVITSMPTYANVCAPVAGAVPTEYPMLR
PVPMVPVFMANAAAEKTAAPCVEGPPLNAQGIPTDMAACKTQTLARPAMPPCSTEGPVRT
PGGSSEETGPKEELASKCQEVDFPPTKVAATQISWVMVNKEINTEPYGPFEAKLGEISQL
VKEYQILQQQLQEASNSYEQKKLQSSEETKDLEEKLTRNMEENKISKTELNWFLQDLEKE
IKKWEQEKKEIQDKLKALKKKMKMFLTSSDTLTEENAEIDDNDQDQESFLDEAPETSCTF
TEEKAQVEDCIKKGKDSYEETLHRAVSAEVSVLETWKETEMYKLQVMESQAEAYLKNLKL
MRSDSAAYPDIESDIQSWESFLSDVRKETEKAKDQFEEQIKGIKNGSRLSDLSKVQISEL
SFPASHRMNPQLTTKSLGPEDQAPAPAMRPGTEDQAAAPQEFCVASASDGFAEASPTADE
AGIDLTAQAEVSPGGPEPEQMMQPGQFLTSVVEQLLVVFPCFSSSQLTEFIEEVQNRDMM
ALLGWSTEEIVQRVTKLILEEQDLSDPEDDWPPESASASAMATVTSDPEDCPSLQLEPRL
EPMSMGQRTRVLVSIICEICHEVFNNSKTMRVLKCGYKFHKECFRRWLQEQSACPMCLEL
NLISEE
NT seq
5781 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctaaaggctatgttcagagggagagaaacttagagtatgatatctgtaacatg
tggtgcagtaagccgatttcggtcctgcaagattactgtgctgctattaaggtgcatatc
ttctggccacttctgtttcaaaatgagaacagttctatcctcttgcaaactcagccccgt
gtggagcccaggggttctcaagctcccgagatgagtttgaagaaattgcagcatatagag
ttgatggaagagattgttgatttgatcaagagagttgtgaatgatccattttttattgga
agcttactgcgaattggctataaaattgaaaacaaaatcttgaccatggaagaagctttg
aactgggtgaaatacactggtgatatgacaattctacccaagttgggagcaattgacaat
tgttggcccatgttgagccttttctttactgaatataaataccacataactaaagttgtg
acagaaaactacgatttgctggaagactttagaacacaaagttgtccggaatgtatcgag
caaggggaggtcatgaagctcaaaggaaatgaagcattttccaaagaaagatttgatatg
gctattatctattacaccagagccattgagtatagtccggaaaatcatcttctttatggt
aaccgagcgctttgtttcctttgcactggacagttcagaaatgctctcggtgatggaaag
cgagccaccattttgaagagcagttggaccaagggtcattatcgttattgcgatgctctt
tctatgctgggagagcttgactgggccctacaagcaaacataaaggctcagaaactctgt
aggaatgaccctgagggaatcaaggatctgattcagcaggagttaaagttgcaaaaacaa
atagaagacctgcaaggtcaaaccctaactcggaatccaattaaagcctcttacaaaagc
agggcctacgtctctactttatcagcacctgcattcagagcttcacttaattttgccgat
tctggaaaagattccagaaagaccaaccccagaatggccagtggtggttatcacaacatg
aggatggggaacgactctttgaagcccaatgactgtggctgtcatcctgattttggacag
gcttcaggccagacttcaaaacataaaggaaaacagaaatccagaaacaatgaactggag
aaattgagtgcttcgaactcacaaacaactctaccaatggatttgaaaaacatcttggag
aaacagttttctaaatcttccagagatgcacaccaggactttgcaaacatcatgaagatg
ctgaggagcctgatccaggatggttacacagcgctaatggaacagagatgccaaaatgct
gctcaggccttcacagatcttctcaatgggctggaccctcagaaaatcaagcaactgaac
ctgaccatgatcaactatgtcttagtcatctatggactggccatttctctccttggaata
ggacagcctgaggaattgtcagaggctgagaaccagttcaagaggatgattgaacactac
cccagtgagggcctcgactgcctggcctactgcgggattggaaaagtatatctgaagaaa
aataggtttctggaagcgctcaatcactttgagaaagcccggaccttgatttgccggctt
cccagagtcctgacttggcccacaagcaatgtggtgattgaagagacaaggccaggaaag
atcaagttgctgttggagaaattcatcgaggaatgcaagttccctccagtacctgatgct
atttgctgctatcaacagtgccgcggatactccaaaattcagatctacgtaacagaccct
gattttaagggcttcatccggatcagctgctgccagtattgtaagattgaatttcacatg
aattgttggaagaagttgaagaccaccaccttcaatgacaaaatcgacaaggacttcctg
cagggaatctgtcttacccctgactgtgaaggaatcatttccaagatcatcatctatagc
agcagcggacaagttaaatgtgagtttgaacacaaggtcataaaagaaaaagtttctcca
agacctattctgaagcagaaatgttctagcctggagaagttaaaactgaaagaagacaaa
aaactgaagagaaagatccagaagaaagaagcaaagaaattagcccaggagcgaatggaa
gaggatctgcgagaaagtaatccacccaaacaggaagagaagaaagaaacaaccaataaa
gcccagaaatgccagttcctggatgacaggatcctgcagtgcatcaagcagtactcagag
aagatcaaatctggcatccagaaccccaccaagcttctcaaggaacttctgtcctggaag
gtgctgagcaccgaggactacaccacctgcttctccagccgtaacttcgtcaatgaagcc
gttgactatgtcattcgccacctggttcaggaaaataaccgagtgaaaacaagaatcttt
ctgcatgtgttgagtgaactcaaagaagtggagccgaaactagcgacctggatccagaaa
ctcaatggatttggtcttgatgccacaggaccttttctcttacgatacggagcatctctt
aaggagcttgatttcagcatcatgacttttctctggaatgagaagtatggccataaactg
gcttccattgaaggcaagcagctggattatttctgtgagccagcttcctcggaggaggca
agatatctgatctggctcctggaggaacacagggaaaaattcccagcattgcataatgct
ctggatgaattctttgatgtaatggacagtcgctgtactgtgctgaggaaacaagatagt
ggggatgtgccattgagctcacccaagataaaacacaaaggcaagaaaaggaagctgaaa
gattcaaagcccatattagttggatctggagcagcctcagtaacaacaaataatgacact
gtcaactctggtgaagaccataaatccacttccagttctttaggtccatttgtggttcct
gagcatctccggcaagacgtagaagaattcgaggccctgtatgagcagcacaacagcagt
gaatatgttgttcacaacaagaaactgttggacgttaacccaaagcagaaaggttcgact
ctgtatgactacttttcccagctgctggagaagcacagccccctggacatgagcaacaag
atgttctctgaggaatacgagttcttccctgaggagacgcggcagatcctggagaaggtg
ggtgacctcaagaccttccttcttgcctgccctcgctttgagctcatcgacaactgcatt
gcactgaagaaagtcacctctcgccacaagaagaagcgaaagaagaagaacatcaaggta
aaagttgaggagatcacagccaagtccggtgagtatctgcgggccgagctccccctgaat
ccagccgcgcgggaattcaaacctgatgttaagcccaagtccagggccccagcctctgcc
ccagccgccatcaagccgcccagagcagcaccggccaatgcgagtccccccaagccagcg
cctgaagtggctccgaaacccaaatccccaaaagctgcatcaggtcctgcctctggatca
cttcccgaggccgcaccccccaaagttggggtctctcccgagtcccccttgcccagcgct
gaagaccctggtcaccagcatgtctcctgtccttccatgcaagggtctgaggccgtgatg
cccacctactgggcacaaccccagatggtcacaggctactgcacctatctcccctaccaa
ggctatggcattgcccagatgccccccacctacatcaatgtgatcaccagcatgcccacc
tatgccaacgtttgtgccccagtggcaggggcggttcccaccgagtaccccatgctgagg
cctgtgcccatggtccccgtgttcatggccaatgctgcagcagagaagacagctgcgccc
tgtgtggagggtcccccactgaatgcccagggaatccccactgacatggcagcctgcaag
acacagaccttggcaagaccagccatgcctccatgcagcacagaggggcctgtcagaact
ccaggtggaagtagtgaggaaacaggtcccaaggaagagttggctagcaagtgccaagaa
gtagattttccacccacaaaagtggctgccacccagatatcttgggttatggtgaataaa
gaaatcaacactgagccctatggcccttttgaggctaaactgggagaaatttcacagctc
gtaaaggagtaccaaattctgcagcagcagctgcaggaagcctccaacagttatgagcag
aaaaaactgcagagctcggaggagaccaaggatctggaagaaaagctgacaaggaacatg
gaagaaaacaagatttcaaagacagaattgaactggttccttcaagatttggagaaagaa
atcaaaaaatgggagcaggagaagaaagagatccaagacaaactcaaagcactcaaaaag
aagatgaagatgtttttgacttccagtgacacactcactgaggaaaatgcggaaattgac
gacaatgatcaggaccaggaatcctttctggatgaggctcctgaaaccagttgcacattc
accgaggagaaggcacaggtggaggactgcatcaagaaaggcaaagacagttatgaagag
actcttcaccgggccgtgtctgctgaggtgtctgtgcttgaaacctggaaggagacggaa
atgtataagttacaggtcatggaatcccaggcggaagcttatctgaagaacctcaaactc
atgaggagtgattctgcagcctatccagacatcgagtctgacatacagtcctgggaatct
tttctctctgatgtccgaaaagaaactgagaaagcaaaggaccagtttgaggagcaaatt
aaggggattaaaaatggctctcgactgagtgacctttctaaagtccagatttctgagctg
tcctttcctgcctcccacaggatgaaccctcagcttaccaccaagtctttgggccccgag
gatcaggcccccgcccctgccatgcgtcctgggaccgaggaccaagcagcagctcctcaa
gagttttgtgtggcttctgccagtgatggctttgctgaagcctctcctactgcagatgaa
gctggcatagaccttactgctcaagcagaagtcagcccaggaggcccagagcctgagcag
atgatgcagccaggccagtttttgaccagtgttgtggaacagctgttggtggtgttccca
tgtttcagcagctcccagctcaccgagttcattgaagaagtccagaacagggacatgatg
gcactgttgggatggagcactgaggaaattgtgcagagagtgaccaagctcattctggag
gagcaggacctgtctgatccagaggacgattggcccccagagtccgcctctgcctctgcc
atggctactgtgaccagcgatcccgaagactgcccttctctgcagctggagcctcggctg
gagcccatgagcatgggacagaggaccagggtccttgtgtcaataatttgtgaaatctgc
catgaggttttcaacaattccaaaactatgcgtgtgttaaaatgtggatacaaattccac
aaagagtgcttcaggcgatggcttcaagagcagagtgcctgccccatgtgcctggaactc
aacctgatatctgaagagtag
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integrated database retrieval system
