KEGG   Suncus etruscus (white-toothed pygmy shrew): 126000905
Entry
126000905         CDS       T09902                                 
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr01524  Platinum drug resistance
setr03440  Homologous recombination
setr03460  Fanconi anemia pathway
setr04120  Ubiquitin mediated proteolysis
setr04151  PI3K-Akt signaling pathway
setr05206  MicroRNAs in cancer
setr05224  Breast cancer
Brite
KEGG Orthology (KO) [BR:setr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    126000905 (BRCA1)
  09124 Replication and repair
   03440 Homologous recombination
    126000905 (BRCA1)
   03460 Fanconi anemia pathway
    126000905 (BRCA1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    126000905 (BRCA1)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    126000905 (BRCA1)
  09162 Cancer: specific types
   05224 Breast cancer
    126000905 (BRCA1)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    126000905 (BRCA1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:setr01009]
    126000905 (BRCA1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:setr04121]
    126000905 (BRCA1)
   03036 Chromosome and associated proteins [BR:setr03036]
    126000905 (BRCA1)
   03400 DNA repair and recombination proteins [BR:setr03400]
    126000905 (BRCA1)
Enzymes [BR:setr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     126000905 (BRCA1)
Protein phosphatases and associated proteins [BR:setr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     126000905 (BRCA1)
Ubiquitin system [BR:setr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    126000905 (BRCA1)
  Multi subunit type E3
   BRCC complex
    126000905 (BRCA1)
Chromosome and associated proteins [BR:setr03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     126000905 (BRCA1)
DNA repair and recombination proteins [BR:setr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     126000905 (BRCA1)
    BRCA1-A complex
     126000905 (BRCA1)
    BRCA1-B complex
     126000905 (BRCA1)
    BRCA1-C complex
     126000905 (BRCA1)
    BRCA complex
     126000905 (BRCA1)
   FA (Fanconi anemia) pathway
    Downstream FA components
     126000905 (BRCA1)
SSDB
Motif
Pfam: BRCT zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_4 zf-RING_2 zf-RING_5 RING_XB3-XBAT31 zf-RING_6 BRCT_2 zf-Nse zf-ANAPC11 zf-RING_10 Baculo_IE-1 Prok-RING_4 RTT107_BRCT_5 zf-rbx1 zf-RING_4 Med28
Other DBs
NCBI-GeneID: 126000905
NCBI-ProteinID: XP_049624046
LinkDB
Position
1:complement(190323669..190405497)
AA seq 520 aa
MDLSMDHVEEVQNVLNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKEPSQ
CPLCKTAITKRSLQESTRFSQLAEELLKIIHAFELDTGLQFANSYNFLKKDKDKNSPDHQ
KEEVSIIESMGYRNRVKKLRQTENSTTQESRQSVQLPNHGVERFLRTKPQLQSCKKSVYI
ELGSDSSEDSVKTSYCSLGDNGLLHIIPQEAKTEASLNSAKKAACGFSEKNIADIKHHQP
CHKDLTTTEKQAAEKHPENYQSEAVSGYVSETSDSEDCSELSSQSAILTTQQKDTMQDNL
IKLRQEMAELEAVLEQHGSQLTHCSSPLRDDPCAPEDLVNPEQDISDKDAELVCERTLKY
FLGVAGGKWIVSYFWVTESIKEKKLLDEHDFEVKGDVVNGRNHQGPKRARESQEIKIFRN
LEMCCYGPFTNMPTDQLEWMLRLCGASVVKELSSFTHSKDTQPIVIVQPDAWEDSGFHGI
GQICDAPVVIREWVLDSVTLCQCQELENYLVPQISKESCC
NT seq 1563 nt   +upstreamnt  +downstreamnt
atggatttatccatggatcacgttgaagaagttcaaaatgttctgaatgctatgcagaaa
atcttagaatgtcctatctgtctggagttaatcaaagagcctgtttccacaaaatgtgac
cacatattttgcaaattctgtatgctgaaacttctcaaccagaagaaagaaccttcacag
tgtccgttgtgtaagacagctataaccaaaagaagcctgcaagaaagtacaagatttagt
caacttgctgaagaactattgaaaatcattcatgcttttgaacttgacacaggattacaa
tttgcaaacagttacaactttctgaaaaaggacaaggacaaaaactctcctgatcatcaa
aaggaggaagtttctattatcgagagtatgggctaccgcaaccgtgtcaaaaagcttcga
caaactgaaaattctactacgcaggaatccagacagagtgtccaacttcctaaccatgga
gttgagagatttctgagaacaaagccgcagctacagtcctgtaaaaagtctgtctatatt
gaactgggatctgattcttctgaagactcagttaagacaagttattgtagtttgggagac
aatggattgttacatatcatccctcaagaagccaaaactgaagccagtttgaattctgca
aaaaaggctgcttgtgggttttctgagaagaacatagcagatatcaaacatcatcagccc
tgtcataaagatttgaccaccactgagaagcaggcagctgagaagcatccagaaaactat
caaagtgaagcagtttctgggtatgtgagtgaaacaagtgactctgaagactgttcggag
ctgtcctctcaaagtgctattttaaccactcagcagaaggataccatgcaagataacctg
ataaagctccggcaggaaatggctgaactcgaagctgttttagaacaacatgggagccag
cttactcattgctcctctcctctcagagatgatccttgtgcccctgaggaccttgtaaat
ccggaacaagacatatcagacaaagatgctgaattggtctgtgaacggacactgaaatat
tttctgggagttgcaggaggaaaatggatagttagctatttttgggtgacagaatcaatc
aaagaaaaaaagctactggatgagcatgactttgaagtcaaaggagatgttgttaatgga
agaaaccaccaaggtccaaagagagcaagagaatcccaggaaataaagatcttcagaaac
ttagaaatgtgttgctatgggccctttaccaacatgccaacagatcaactggagtggatg
ctgcgcctctgtggggcgtctgtggtaaaagagctttcatcattcacgcatagcaaggat
actcagccaattgtgatcgtgcagccagatgcctgggaggacagtggttttcatggaatt
ggacagatatgtgatgcacctgtggtgatacgggaatgggtattggacagtgtaaccctc
tgccaatgccaggaattggaaaactacctggtacctcagatctcaaaggagagttgctgc
taa

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