KEGG   Suncus etruscus (white-toothed pygmy shrew): 126002675
Entry
126002675         CDS       T09902                                 
Symbol
IFNB1
Name
(RefSeq) interferon beta
  KO
K05415  interferon beta
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04060  Cytokine-cytokine receptor interaction
setr04151  PI3K-Akt signaling pathway
setr04217  Necroptosis
setr04380  Osteoclast differentiation
setr04620  Toll-like receptor signaling pathway
setr04621  NOD-like receptor signaling pathway
setr04622  RIG-I-like receptor signaling pathway
setr04623  Cytosolic DNA-sensing pathway
setr04630  JAK-STAT signaling pathway
setr04650  Natural killer cell mediated cytotoxicity
setr04668  TNF signaling pathway
setr04936  Alcoholic liver disease
setr05135  Yersinia infection
setr05142  Chagas disease
setr05152  Tuberculosis
setr05160  Hepatitis C
setr05161  Hepatitis B
setr05162  Measles
setr05163  Human cytomegalovirus infection
setr05164  Influenza A
setr05165  Human papillomavirus infection
setr05167  Kaposi sarcoma-associated herpesvirus infection
setr05168  Herpes simplex virus 1 infection
setr05169  Epstein-Barr virus infection
setr05170  Human immunodeficiency virus 1 infection
setr05171  Coronavirus disease - COVID-19
setr05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:setr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04630 JAK-STAT signaling pathway
    126002675 (IFNB1)
   04668 TNF signaling pathway
    126002675 (IFNB1)
   04151 PI3K-Akt signaling pathway
    126002675 (IFNB1)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    126002675 (IFNB1)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    126002675 (IFNB1)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    126002675 (IFNB1)
   04621 NOD-like receptor signaling pathway
    126002675 (IFNB1)
   04622 RIG-I-like receptor signaling pathway
    126002675 (IFNB1)
   04623 Cytosolic DNA-sensing pathway
    126002675 (IFNB1)
   04650 Natural killer cell mediated cytotoxicity
    126002675 (IFNB1)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    126002675 (IFNB1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    126002675 (IFNB1)
   05161 Hepatitis B
    126002675 (IFNB1)
   05160 Hepatitis C
    126002675 (IFNB1)
   05171 Coronavirus disease - COVID-19
    126002675 (IFNB1)
   05164 Influenza A
    126002675 (IFNB1)
   05162 Measles
    126002675 (IFNB1)
   05168 Herpes simplex virus 1 infection
    126002675 (IFNB1)
   05163 Human cytomegalovirus infection
    126002675 (IFNB1)
   05167 Kaposi sarcoma-associated herpesvirus infection
    126002675 (IFNB1)
   05169 Epstein-Barr virus infection
    126002675 (IFNB1)
   05165 Human papillomavirus infection
    126002675 (IFNB1)
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    126002675 (IFNB1)
   05152 Tuberculosis
    126002675 (IFNB1)
  09174 Infectious disease: parasitic
   05142 Chagas disease
    126002675 (IFNB1)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    126002675 (IFNB1)
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    126002675 (IFNB1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:setr04052]
    126002675 (IFNB1)
Cytokines and neuropeptides [BR:setr04052]
 Cytokines
  Interferons
   126002675 (IFNB1)
SSDB
Motif
Pfam: Interferon DUF7605
Other DBs
NCBI-GeneID: 126002675
NCBI-ProteinID: XP_049625353
LinkDB
Position
1:complement(48120223..48120780)
AA seq 185 aa
MANRYIFQITLLLCFFTTAFSMSYQLLRSRQRSSNLACQRILSELNGNLTECLQQRINST
IPEEIKQPELLQKDDVLLVISEMLRQIFGIFSRNSSCTGWNKSIIEKLFLELQQQMDYVE
TSLEERKKENVTSYNRTILHLKKYYLKLLKYLKANGYSNCAWLIVKTEISRNFVFLNRLI
NYLPN
NT seq 558 nt   +upstreamnt  +downstreamnt
atggccaacaggtatattttccaaatcactctcctgctgtgtttcttcaccacagctttt
tccatgagctatcaattgcttcgatctcgacaaagaagcagcaatttggcatgccaaagg
atcctgagtgagctgaatgggaaccttactgaatgcttacagcagaggatcaacagcacc
atcccagaggagattaaacaacctgagctccttcaaaaggatgatgtcctactagttatc
tctgagatgcttcggcagatcttcgggatcttcagcagaaattcttcttgtactggctgg
aataagagcatcattgagaaactcttcttagaactccaacagcagatggactatgtggag
acctcactggaggaaagaaaaaaggaaaatgtcaccagctataataggaccattctgcat
ctaaagaaatattacttgaagctcctaaagtacctaaaggccaatggatatagtaattgt
gcctggttaatagtcaaaacggaaatctccaggaactttgtcttcctcaacagacttatc
aattacctcccaaactga

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