Suncus etruscus (white-toothed pygmy shrew): 126003705
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Entry
126003705 CDS
T09902
Symbol
TRPC3
Name
(RefSeq) short transient receptor potential channel 3
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04360
Axon guidance
setr05017
Spinocerebellar ataxia
setr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
126003705 (TRPC3)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
126003705 (TRPC3)
05022 Pathways of neurodegeneration - multiple diseases
126003705 (TRPC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
setr04040
]
126003705 (TRPC3)
Ion channels [BR:
setr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
126003705 (TRPC3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
126003705
NCBI-ProteinID:
XP_049625996
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Position
3:129083390..129117359
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AA seq
848 aa
AA seq
DB search
MEESPAERRSALMREKGRRQAVRGPAFMFHERGTSLTAEEERFLDAAEYGNIPVVRKMLE
DSRSLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARIGDALLLAISKGYVRIVEA
ILNHPGFAASGRLTLSPCEQELQDDDFYAYDEDGTRFSPDITPIILAAHCHKYEVVHMLL
LRGARIERPHDYFCKCGECADRQRLDAFSHSRSRINAYKGLASPAYLSLSSEDPVLTALE
LSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAILNGDLDSVEPLELH
RHKVSLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTVAIKCLVVLVVALGL
PFLAIGYWVAPCSRLGKILRSPFMKFVAHAASFIIFLGLLVFNASDRFEGITTLPNMTVV
DYPKQIFRVKTTQFTWTEMLIMVWVLGMMWSECKELWLEGPREYILQLWNVLDFGMLSIF
IAAFTARFLAFLQATKAQQYVDSFVQESDLSEVTLPPEIQYFTYARDKWLPSDPQIISEG
LYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAFMIGMFILYS
YYLGAKVNAAFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFIENIGYVLYGIYNVTMVV
VLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPPFSLVPSPKSFVYFV
MRIINFSKCRRRRFQKDIEIGMGNSKSRLNLVTQSNSRVFESHSFNSILNQPTRYQQIMK
RLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDKNQATEELAVLIHKLSEKL
NPSVLRGE
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaagcccagctgagcggcgctcagcgctgatgcgggagaagggccggcgccag
gctgtgcggggtcctgccttcatgttccatgagcgcggcactagcctcacagccgaggaa
gagcgattcctggatgcagccgagtatggcaacattccggtggtgcgcaagatgctggag
gactcgcggtccctcaacgtcaactgcgtggactacatgggccagaacgcgctgcaactg
gcggtgggcaacgagcacctggaggtcacggagctgctgctcaagaaggagaacctggcg
cgcatcggcgatgcgttgctgctggccatcagcaagggctacgtccgcatcgtggaggcc
atcctcaaccaccccggctttgcggccagcggccgcctgacgctgagcccctgcgagcag
gagttgcaggacgacgacttctatgcttacgacgaggacggcacgcgcttctcacccgac
atcacacccatcatcctggctgcgcactgccacaagtacgaggtggtgcacatgctgctg
ctccggggagcgcgcatcgagcggccccacgactacttctgcaagtgcggggaatgtgct
gaccgtcagcggctcgacgccttcagccattcgcgctccaggatcaacgcctacaaggga
ctggccagtcctgcctacctgtctctgtccagcgaggaccccgtgctcaccgccctggag
ctcagcaacgagctggccaagctggccaacatcgagaaggagttcaagaacgactaccgg
aaactctccatgcagtgcaaagacttcgtggtgggtgtgctggacctgtgccgggactct
gaagaggtagaagcaattctcaatggggacctggactcagtggagcctctggagctgcac
aggcacaaagtctccctcagtcgtgtcaagttggccattaagtatgaagtcaagaagttt
gtggcccaccccaactgccagcagcagctcctgaccatctggtatgagaacctctccggc
ctgcgggaacagacggtggccatcaagtgtctggtggtgctggtcgtggcactgggactc
ccattcctggccattggctactgggtcgccccatgcagcaggctggggaagattctgcgc
agccccttcatgaagtttgtggctcatgctgcatccttcatcatcttcctgggcctgctg
gtgttcaacgcctctgacagatttgagggcatcaccacattgcccaatatgactgtcgtg
gattaccccaaacagattttcagggtgaaaaccacccagttcacgtggacagaaatgctc
atcatggtctgggttctgggaatgatgtggtctgagtgcaaggagctgtggctggaaggt
ccccgtgagtatatcctgcaactgtggaatgtactggacttcgggatgctctccatcttc
atcgctgccttcacggccaggttccttgctttccttcaggccaccaaggcacagcagtat
gtggacagctttgtccaggagagtgacctcagtgaagttacactcccaccagaaatccag
tatttcacatacgccagagataagtggctgccctctgaccctcagatcatatctgaaggc
ctctatgccatcgccgttgtgctaagcttctctcggattgcctatattctccctgccaat
gagagcttcgggcccttacagatctctctcggaagaaccgtgaaggatatattcaagttc
atggtcctcttcatcatggtgtttcttgcctttatgatcggcatgttcatcctttattct
tactaccttggggctaaagttaatgctgcttttaccactgtagaagaaagtttcaagaca
ctgttttggtccatatttggcttgtctgaagttacgtccgtcgtgctcaaatatgaccac
aagttcattgagaacattggttatgtcctttatggcatctacaacgtcaccatggtggtg
gtgctgctcaacatgctcatcgccatgatcaacagctcctaccaggagatcgaggatgac
agtgatgtggaatggaagtttgcacgctccaaactctggctgtcttattttgatgatgga
aagacattacctccacccttcagtctagttcctagtccaaagtcatttgtttattttgtc
atgcggatcattaacttctccaaatgcagaaggagaaggttccagaaggatatagaaata
ggaatgggcaactcaaagtctaggttaaatcttgtcactcagtctaactcgagagttttt
gaatcacacagttttaacagcattctcaaccagccaacacgttatcagcaaataatgaaa
agacttataaagcgatatgttttgaaagcacaagtggacaaagaaaatgatgaagttaat
gaaggtgaattaaaagaaatcaagcaagatatctccagccttcgttatgaacttttggag
gacaagaatcaggctactgaagaattagctgttctaattcacaaactcagtgagaagctc
aatcctagcgtgctgagaggtgaatga
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