KEGG   Suncus etruscus (white-toothed pygmy shrew): 126006345
Entry
126006345         CDS       T09902                                 
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03420  Nucleotide excision repair
setr04066  HIF-1 signaling pathway
setr04110  Cell cycle
setr04114  Oocyte meiosis
setr04120  Ubiquitin mediated proteolysis
setr04141  Protein processing in endoplasmic reticulum
setr04310  Wnt signaling pathway
setr04350  TGF-beta signaling pathway
setr04710  Circadian rhythm
setr05170  Human immunodeficiency virus 1 infection
setr05200  Pathways in cancer
setr05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:setr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    126006345 (RBX1)
   04120 Ubiquitin mediated proteolysis
    126006345 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    126006345 (RBX1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    126006345 (RBX1)
   04350 TGF-beta signaling pathway
    126006345 (RBX1)
   04066 HIF-1 signaling pathway
    126006345 (RBX1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    126006345 (RBX1)
   04114 Oocyte meiosis
    126006345 (RBX1)
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    126006345 (RBX1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    126006345 (RBX1)
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    126006345 (RBX1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    126006345 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:setr04121]
    126006345 (RBX1)
   03400 DNA repair and recombination proteins [BR:setr03400]
    126006345 (RBX1)
Enzymes [BR:setr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     126006345 (RBX1)
Ubiquitin system [BR:setr04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   126006345 (RBX1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     126006345 (RBX1)
   Cul2 complex
     126006345 (RBX1)
   Cul3 complex
     126006345 (RBX1)
   Cul4 complex
     126006345 (RBX1)
   Cul7 complex
     126006345 (RBX1)
   Cul8 complex
     126006345 (RBX1)
   Cul9 complex
     126006345 (RBX1)
DNA repair and recombination proteins [BR:setr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      126006345 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      126006345 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 126006345
NCBI-ProteinID: XP_049627699
LinkDB
Position
4:7755661..7775737
AA seq 108 aa
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcagcgatggatgtggataccccgagcggcaccaacagcggcgcgggcaagaag
cgttttgaagtgaaaaagtggaatgcagtagccctctgggcctgggatattgtggtcgat
aactgtgccatctgcaggaaccacattatggatctttgcatagagtgtcaagcgaaccaa
gcatccgcgacttctgaagagtgcacagtggcgtggggcgtctgtaaccacgcgtttcac
tttcactgcatctcccgctggctcaagacgaggcaggtgtgtccgctggacaacagagag
tgggagttccaaaagtatggccactaa

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