Suncus etruscus (white-toothed pygmy shrew): 126006402
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Entry
126006402 CDS
T09902
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr01521
EGFR tyrosine kinase inhibitor resistance
setr04010
MAPK signaling pathway
setr04014
Ras signaling pathway
setr04015
Rap1 signaling pathway
setr04020
Calcium signaling pathway
setr04072
Phospholipase D signaling pathway
setr04151
PI3K-Akt signaling pathway
setr04510
Focal adhesion
setr04540
Gap junction
setr04630
JAK-STAT signaling pathway
setr04810
Regulation of actin cytoskeleton
setr05165
Human papillomavirus infection
setr05200
Pathways in cancer
setr05206
MicroRNAs in cancer
setr05214
Glioma
setr05215
Prostate cancer
setr05218
Melanoma
setr05230
Central carbon metabolism in cancer
setr05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
126006402 (PDGFRB)
04014 Ras signaling pathway
126006402 (PDGFRB)
04015 Rap1 signaling pathway
126006402 (PDGFRB)
04630 JAK-STAT signaling pathway
126006402 (PDGFRB)
04020 Calcium signaling pathway
126006402 (PDGFRB)
04072 Phospholipase D signaling pathway
126006402 (PDGFRB)
04151 PI3K-Akt signaling pathway
126006402 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
126006402 (PDGFRB)
04540 Gap junction
126006402 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
126006402 (PDGFRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
126006402 (PDGFRB)
05206 MicroRNAs in cancer
126006402 (PDGFRB)
05230 Central carbon metabolism in cancer
126006402 (PDGFRB)
05231 Choline metabolism in cancer
126006402 (PDGFRB)
09162 Cancer: specific types
05214 Glioma
126006402 (PDGFRB)
05218 Melanoma
126006402 (PDGFRB)
05215 Prostate cancer
126006402 (PDGFRB)
09172 Infectious disease: viral
05165 Human papillomavirus infection
126006402 (PDGFRB)
09176 Drug resistance: antineoplastic
01521 EGFR tyrosine kinase inhibitor resistance
126006402 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
setr01001
]
126006402 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
setr04090
]
126006402 (PDGFRB)
Enzymes [BR:
setr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
126006402 (PDGFRB)
Protein kinases [BR:
setr01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
126006402 (PDGFRB)
CD molecules [BR:
setr04090
]
Proteins
126006402 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
C2-set_2
VEGFR-1-like_Ig-like
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
126006402
NCBI-ProteinID:
XP_049627758
LinkDB
All DBs
Position
4:154443565..154478845
Genome browser
AA seq
1147 aa
AA seq
DB search
MLTTPSIGDKRDQGPEACGLSPTAGRAKDGVPLMRDRNWKAWAASAQLGPDSHITLQDTM
RLLNPRSTSVLKDPVLLLPLLLLLAPTAASDLLITPPGPELVFNFSSTIDLTCLGSAPVV
WERVFQLPQQKTAKMQNDTFSSRLVLANVTGLDTGEYFCVSKFTRKRLYIFVPDPSMVFL
PATAEELFVFRTEITENTTIPCHVTDPELVVTLHEKKEDVPLPVPYDHQRGFTGSFEDKT
YICKTTIDDKEVDSEPYYVYSIQVSSINVSVNAVQTVVRQGENITIMCIVTGNEVVNFEW
TYPRLESGQVVEPVTDFLFNTPSHIRSILTIPNAELGDSGIYVCNVSESVNDHQDEKDIN
ITVVESGFVRLLQEPDAVEFADLHRSRTLQVLFESYPPPTIVWFKDNRTLSDSGTGEFAL
SLHNVSETRYMSELTLVRVKVEEAGHYTMRAFHEDAEAQLSFRLQVNVPVRVLELSESHP
ASGEQTVQCRGQGMPQPHLTWSTCSDLKRCPREMPTRKLANLSEIETNVTYKEEEKVFEV
VSTLRLARIDQPLSVRCTLDNQLTQDMQEVIVVPHSLPFTVVVISAILALVVLTVISLII
LIMLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSTWELPRNQLVLGRTLGSGAF
GQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGAC
TKGGPIYIITEYCRYGDLVDYLHRNKHTFLQLHSDKRPPLSSELYSNTLPSPLSLSVESD
GGYMDMSKDESVDYVPMLDLKGDVRYADIDSSTYLAPYDNYVPSAPERTYRATLINESPV
LSYTDLVGFSYQVANGMEFLAAKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNY
ISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGVLLWEIFTLGGTPYPELPMNEQFYNAI
KRGYRMAQPAHASDEIYEIMQKCWEEKFEIRPPFSQLVLLLERLLGEGYKKKYQQVDEEF
LRSDHPAILRSQARLPVFPGLRSPLDTSSVLYTAVQPNEGDNNYIIPLPDPKPDVAEEGP
PEGSPSLASSTLNEVNTSSTISCDSPLDPQEEPELEPQQHGEPESQPEQHLEASCPAQQA
EVEDSFL
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgctcacaacgccaagcatcggagataagagagatcaaggcccagaggcgtgtgggctc
agtccaactgcaggcagagctaaagatggggtgcccctcatgcgagacagaaactggaag
gcctgggctgcttctgcccagctgggacctgactctcatataactctgcaggacaccatg
cggctcctgaatcccaggtccacttctgtcctcaaagatcccgttctgctgctacctctg
ctgttactgctggcacccactgctgcctctgatctgctcatcacacccccaggaccagaa
cttgtcttcaatttctccagcaccattgacctgacctgcttaggatctgctccagtggtg
tgggaacgggtgttccaactgccacagcagaaaacagccaagatgcagaatgataccttc
tccagcaggctggtgcttgccaatgtcaccgggctggacacgggagaatacttctgtgtt
tccaagtttactcgtaaacggctttatatctttgtgccagatccttccatggtcttcctc
cctgccactgcagaggagctttttgtctttcgcacggaaataacggagaacaccaccatt
ccatgccatgtcacagaccccgagctggtggtgacactgcatgaaaagaaagaggatgtg
ccgctgcctgttccctatgaccaccaacgtggcttcaccggcagctttgaggataagacc
tacatctgcaaaactaccattgatgacaaggaggtggactctgaaccctactatgtctac
agcatccaggtctcatccatcaatgtgtctgtgaatgcggtgcagaccgtggtccgccag
ggcgagaacatcaccatcatgtgcattgtgacagggaatgaggtggtcaactttgagtgg
acgtacccccgcctagagagtgggcaggtggtggagccagtgaccgacttcctcttcaac
acaccctctcatatccgctccatcctgaccatccccaatgctgagctgggagattctggg
atctacgtctgcaatgtgtcagagagtgtgaacgaccaccaagacgaaaaggacatcaat
ataactgtggtggagagtggcttcgtgagactgctgcaggagccggatgctgtagagttc
gctgacttgcatcgcagccggacactgcaggtgctgtttgagtcctacccaccgcccacc
atcgtgtggttcaaggataatcgcaccctaagtgattctggcaccggcgagtttgccctg
tccttacacaacgtttctgagacccgctacatgtcagaactgaccctagtacgggtgaag
gtggaagaggctggccactatactatgcgggccttccatgaggatgcagaggctcagctc
tccttccggctgcaggtgaatgtgcctgtccgtgtgctggagctgagtgagagtcaccct
gccagtggggagcagacggtccagtgccgtggccagggcatgccccagcctcaccttacc
tggtctacctgcagtgaccttaaaaggtgcccgcgcgagatgccgaccagaaaactggcg
aacctttctgaaatagagacaaatgtcacctacaaggaggaggagaaggtgttcgaggtg
gtgagcacgctacgcctggcacgcattgaccagccgctttctgtgcgctgcacgttggac
aatcagctgacccaagacatgcaggaggtcatcgtggtgccacattccctgcccttcaca
gtggtggtgatctcagccatcctggccttggtggtcctcacggtcatctcccttattatt
ctcatcatgctctggcagaagaagccacgctatgagatccgctggaaggtgatagagtct
gtgagctctgatggccacgagtacatctatgtggaccctatgcagctgccctatgactca
acctgggagctaccaaggaaccagcttgtgctgggacgcaccctgggctctggtgccttt
ggacaggtcgtggaggccacagcccatggtctgagccactcacaggccaccatgaaagtg
gctgtgaagatgctgaaatccacagcgcgcagcagtgagaagcaagcactcatgtcggaa
ctgaagatcatgagtcacttggggccgcacctgaacgtggtcaacctgctgggcgcatgc
accaaaggaggacccatctacatcatcactgagtattgccgctacggagacctggtagac
tatctgcaccggaacaagcacaccttcctgcagctccactctgacaagcgcccaccgctt
agctcagagctctacagcaacaccctgcccagccccctgtccctgtccgtggagagtgat
ggtggctacatggacatgagcaaggatgaatcggtggactatgtgccaatgctagacctg
aaaggggatgtcagatatgctgacattgattcttccacctacctggcgccttatgacaac
tacgtcccctctgctccagagaggacctatcgggccactctcatcaacgaatctcctgtg
ctcagctacacagaccttgtgggcttcagctaccaagtggccaatggcatggagttcctt
gcagcaaagaattgtgtccaccgagacttggcagcgaggaatgttcttatctgtgagggc
aagctggtcaagatctgcgactttggcctggcccgagacatcatgcgagactccaattac
atctccaaaggcagcaccttcctacctctgaagtggatggcacctgagagcatcttcaac
agcctctacaccaccttgagtgacgtgtggtccttcggggttctgctctgggagatcttc
acattgggtggcactccatatccggaactgcccatgaatgaacagttctacaatgccatc
aagcggggctaccgcatggctcagcctgcccatgcctctgatgagatctatgagatcatg
cagaagtgctgggaagagaagtttgagatacggccccccttctctcagctggtactcctg
cttgaaaggctgctgggtgagggctacaagaagaagtaccagcaggtggatgaggagttc
ctgaggagcgaccacccagccatacttcgctcccaagctcgtttgcctgtttttcccgga
cttcgatccccactggacaccagttctgtgctgtacactgcggtgcagcccaacgagggt
gacaacaactatatcatcccgctgcctgaccctaagcctgatgttgctgaggaggggccc
ccggagggctcccccagccttgccagctctaccctgaatgaagtcaacacatcctcgacc
atctcctgtgacagccctctagatccccaagaggaaccggagctggagccccagcaacat
ggagagcctgagtcacagccagagcagcacttggaggccagctgcccagcacagcaggct
gaggtggaagacagcttcctgtag
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