Suncus etruscus (white-toothed pygmy shrew): 126006959
Help
Entry
126006959 CDS
T09902
Symbol
CD4
Name
(RefSeq) T-cell surface glycoprotein CD4
KO
K06454
T-cell surface glycoprotein CD4
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03250
Viral life cycle - HIV-1
setr03260
Virion - Human immunodeficiency virus
setr04060
Cytokine-cytokine receptor interaction
setr04514
Cell adhesion molecules
setr04612
Antigen processing and presentation
setr04640
Hematopoietic cell lineage
setr04658
Th1 and Th2 cell differentiation
setr04659
Th17 cell differentiation
setr04660
T cell receptor signaling pathway
setr05135
Yersinia infection
setr05166
Human T-cell leukemia virus 1 infection
setr05170
Human immunodeficiency virus 1 infection
setr05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
setr05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
126006959 (CD4)
03260 Virion - Human immunodeficiency virus
126006959 (CD4)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
126006959 (CD4)
04514 Cell adhesion molecules
126006959 (CD4)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
126006959 (CD4)
04612 Antigen processing and presentation
126006959 (CD4)
04660 T cell receptor signaling pathway
126006959 (CD4)
04658 Th1 and Th2 cell differentiation
126006959 (CD4)
04659 Th17 cell differentiation
126006959 (CD4)
09160 Human Diseases
09161 Cancer: overview
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
126006959 (CD4)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
126006959 (CD4)
05170 Human immunodeficiency virus 1 infection
126006959 (CD4)
09171 Infectious disease: bacterial
05135 Yersinia infection
126006959 (CD4)
09163 Immune disease
05340 Primary immunodeficiency
126006959 (CD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
setr04090
]
126006959 (CD4)
CD molecules [BR:
setr04090
]
Proteins
126006959 (CD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD4-extracel
C2-set
ig
Tcell_CD4_C
V-set
Ig_3
Ig_2
I-set
TMEM51
LapA_dom
Motif
Other DBs
NCBI-GeneID:
126006959
NCBI-ProteinID:
XP_049628453
LinkDB
All DBs
Position
4:14766755..14785453
Genome browser
AA seq
432 aa
AA seq
DB search
MNWLPHLRYLLLGLQLALLPTWGKEVVLGKEGESVELSCKTSKFAFFTWKLQSSQPMLVL
KNLNNNIPLKGKLDLEDRVDSKRTQWNTGSFPLIINKLELKDKGTYVCEVEGKIVTEVDL
QVFAVGQGSSIQWQRPGSQRTQPGGSTFSVNQLQAEDSGIWTCIFSQDQKTLKFHQNILV
KGFKRGPRTVYALEGKQAFFSFPLNFEVEDLNGELRWQSMGTNSPQPWVSFSVKKKKVSL
QGKPHGPKITLKESLPLNFTLPQALAPFAGTGNLSLRLPQVVLSREVKLVVMRVTQSQHN
MTCEVKGPISDSLVLSLLWRNQTKVSGLKQQRLVEVQDPEAGTWQCELRDQTQLLLTSKV
EVSPKGTKISMFMTTMLVGSGLGFLLLIGFCIFCSVRHRRRQTQRMSQIKRLLSERKTCQ
CPHRLQKTCGLV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaactggttgccccatctgaggtacctgcttctgggactgcaactagctctgctcccc
acctggggcaaagaagtggtgctggggaaggaaggcgaatcggtggagctgtcctgtaaa
acttcaaagtttgcgtttttcacctggaagctccagtcctcgcagccgatgctcgttctg
aaaaacttaaacaacaatatccccctcaaaggtaagttggatctggaagatcgtgtggat
tccaaaagaacgcagtggaacactggatcctttcctttgatcatcaacaaacttgaactg
aaggacaaagggacatatgtctgtgaagtggagggtaaaatagtaacagaggtggatctg
caggtattcgcagtcggccagggctcttcaatacaatggcagcgcccaggatcccagcgc
acacagcctggaggctctactttctcggtgaaccaactgcaggctgaggacagtggcatc
tggacatgcatcttctcccaggaccagaagactctgaagttccaccaaaatattctggtg
aagggtttcaagaggggtcctcgcacagtgtatgccttagaagggaagcaggcattcttc
tccttccccttgaactttgaagttgaagatctgaatggggagctaagatggcagagcatg
gggaccaactcgccccagccctgggtctccttctccgtgaagaaaaagaaggtgtctctt
caaggaaaaccccacgggcccaagatcactctgaaggagtcacttcctctgaacttcacc
ctgccccaagctttagccccctttgcgggtacggggaacctcagcctgcgtctcccccaa
gtggtgctaagtcgggaagtgaagctggtggtgatgagagtgactcagtcccagcacaat
atgacctgtgaagtgaagggaccaatctctgattctctggtgttgagcctgctatggagg
aaccagacgaaggtgtcgggcttgaagcagcagaggctggtggaagtgcaggaccctgag
gcggggacctggcagtgtgagctaagggaccagacccagctcctgctgacatcaaaggtg
gaggtctctcctaaaggcacaaagatatctatgttcatgaccacgatgctggtgggcagt
ggcctgggcttcctgcttctcattggcttctgcattttctgctctgtccggcaccgcagg
cgccagacacagcggatgtctcagattaagagactccttagtgagaggaagacctgccag
tgcccccaccggctccagaagacatgtgggctcgtttga
DBGET
integrated database retrieval system
