KEGG   Suncus etruscus (white-toothed pygmy shrew): 126009254
Entry
126009254         CDS       T09902                                 
Symbol
TRAF2
Name
(RefSeq) TNF receptor-associated factor 2
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04010  MAPK signaling pathway
setr04064  NF-kappa B signaling pathway
setr04071  Sphingolipid signaling pathway
setr04137  Mitophagy - animal
setr04141  Protein processing in endoplasmic reticulum
setr04210  Apoptosis
setr04217  Necroptosis
setr04380  Osteoclast differentiation
setr04621  NOD-like receptor signaling pathway
setr04622  RIG-I-like receptor signaling pathway
setr04657  IL-17 signaling pathway
setr04668  TNF signaling pathway
setr04920  Adipocytokine signaling pathway
setr04932  Non-alcoholic fatty liver disease
setr05010  Alzheimer disease
setr05014  Amyotrophic lateral sclerosis
setr05016  Huntington disease
setr05017  Spinocerebellar ataxia
setr05022  Pathways of neurodegeneration - multiple diseases
setr05132  Salmonella infection
setr05135  Yersinia infection
setr05160  Hepatitis C
setr05163  Human cytomegalovirus infection
setr05167  Kaposi sarcoma-associated herpesvirus infection
setr05168  Herpes simplex virus 1 infection
setr05169  Epstein-Barr virus infection
setr05170  Human immunodeficiency virus 1 infection
setr05200  Pathways in cancer
setr05203  Viral carcinogenesis
setr05222  Small cell lung cancer
setr05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:setr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    126009254 (TRAF2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    126009254 (TRAF2)
   04064 NF-kappa B signaling pathway
    126009254 (TRAF2)
   04668 TNF signaling pathway
    126009254 (TRAF2)
   04071 Sphingolipid signaling pathway
    126009254 (TRAF2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    126009254 (TRAF2)
  09143 Cell growth and death
   04210 Apoptosis
    126009254 (TRAF2)
   04217 Necroptosis
    126009254 (TRAF2)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    126009254 (TRAF2)
   04622 RIG-I-like receptor signaling pathway
    126009254 (TRAF2)
   04657 IL-17 signaling pathway
    126009254 (TRAF2)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    126009254 (TRAF2)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    126009254 (TRAF2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    126009254 (TRAF2)
   05203 Viral carcinogenesis
    126009254 (TRAF2)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    126009254 (TRAF2)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    126009254 (TRAF2)
   05160 Hepatitis C
    126009254 (TRAF2)
   05168 Herpes simplex virus 1 infection
    126009254 (TRAF2)
   05163 Human cytomegalovirus infection
    126009254 (TRAF2)
   05167 Kaposi sarcoma-associated herpesvirus infection
    126009254 (TRAF2)
   05169 Epstein-Barr virus infection
    126009254 (TRAF2)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    126009254 (TRAF2)
   05135 Yersinia infection
    126009254 (TRAF2)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    126009254 (TRAF2)
   05014 Amyotrophic lateral sclerosis
    126009254 (TRAF2)
   05016 Huntington disease
    126009254 (TRAF2)
   05017 Spinocerebellar ataxia
    126009254 (TRAF2)
   05022 Pathways of neurodegeneration - multiple diseases
    126009254 (TRAF2)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    126009254 (TRAF2)
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    126009254 (TRAF2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:setr03019]
    126009254 (TRAF2)
   04121 Ubiquitin system [BR:setr04121]
    126009254 (TRAF2)
Enzymes [BR:setr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     126009254 (TRAF2)
Messenger RNA biogenesis [BR:setr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     126009254 (TRAF2)
Ubiquitin system [BR:setr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    126009254 (TRAF2)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd TRAF2_zf zf-TRAF TRAF3_RING zf-C3HC4 zf-C3HC4_2 zf-RING_6 zf-RING_5 zf-C3HC4_4 zf-RING_UBOX zf-RING_2 DUF4795
Other DBs
NCBI-GeneID: 126009254
NCBI-ProteinID: XP_049629618
LinkDB
Position
5:21435556..21441464
AA seq 502 aa
MAAAGVTPPASLDAQLPGFSKALLGARLEEKYLCSACRNVLRRPFQAQCGHRYCSRCLAG
ILSSGPQNCAACVHEGIYEEGVSVLESSSAFPDNAARREVESLPAVCPNQGCSWKGTLKD
YESGHEGHCPFMLTECPACKGLVRLCDREQHAGYECPERSLSCGHCQAPFCGADIKVHQE
TCPQFPLTCEGCSQKIPRHRFQEHGKMCGQGRVPCRFQAVGCPELVENEGQVEHEAQKLR
EHLVLLLSSLLETQRLMGPAQELPSAVELVQRCSSLERKTTTFENIVCVLNREVERAAMT
AEACGRQHRLDQERIEALSNKVQQLERTVGLKDLVIAELEQKVRELEASTHDGVFIWKIS
DFTRKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGPHD
ALLRWPFNQKVTLMLLDHNNREHVIDAFRPDVTSSSFQRPVSDMNIASGCPLFCPVSKME
AKNSYVRDDAIFIKAIVDLTGL
NT seq 1509 nt   +upstreamnt  +downstreamnt
atggctgcagccggcgtgactcctcctgcttccctggatgcgcagctgcccggattctcc
aaggcgctactgggcgcgaggctggaggagaagtacctgtgctcggcctgtaggaacgtg
ctgcggcggcctttccaggcccagtgtggccaccgctactgctcccgatgcctggctggc
atcctcagctctgggcctcagaactgtgctgcctgtgtgcacgagggcatctatgaggag
ggtgtctcagtgctggaaagcagctcggccttccccgacaatgctgcccgcagggaggtg
gagagcctgccagccgtctgtcccaaccaaggctgtagctggaaggggaccctaaaggac
tatgagagtggccacgagggccattgcccgttcatgctgaccgagtgcccagcgtgtaag
ggcctggtgcgtttgtgcgacagggagcagcatgcggggtacgaatgtccagaaaggagc
cttagctgcgggcactgccaggctcccttctgtggagctgacattaaggtgcaccaggaa
acctgtccccaattccccttgacctgcgagggctgcagccagaagatcccacgacacaga
ttccaggagcatgggaagatgtgtggccagggccgagtgccgtgcaggtttcaggctgtt
ggctgtcctgagctggtggaaaacgaggggcaggtggagcatgaggcacagaagcttcgg
gagcacctggtcctgttgctgagcagtcttctggagacccagcgcctcatgggcccggct
caggaactgccctcagccgtagaattggtgcagcgctgcagctctctggagcggaaaaca
accacctttgagaacattgtctgcgtcctaaaccgcgaggtggaaagggcggccatgact
gctgaggcctgtggccggcagcatcgcttggaccaagagcggattgaagccctaagtaac
aaggtgcagcagctagagaggactgtgggcctgaaggacctggtcatagccgagttggag
cagaaggtccgtgagctggaggcctccacccatgacggagtcttcatctggaagatttct
gacttcacccgcaagcgacaggaggcggtggctggccgcacgcctgctatcttctcccca
gccttctacaccagcaggtatggctacaagatgtgtctgcgcatctacctgaatggggat
ggcacgggccgcgggacccacctgtccctcttcttcgtggtgatgcggggcccccacgac
gccctcctgcggtggcctttcaaccagaaggtcacgctgatgctgctggaccacaacaac
cgcgagcatgtcatcgacgccttcaggcccgatgtgacctcatcatccttccagaggccg
gtcagtgacatgaacattgccagcggctgtccactcttctgccctgtctccaagatggag
gccaagaactcctatgtacgtgatgacgccatcttcatcaaggccattgtggacctcacg
gggctctag

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