Suncus etruscus (white-toothed pygmy shrew): 126009254
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Entry
126009254 CDS
T09902
Symbol
TRAF2
Name
(RefSeq) TNF receptor-associated factor 2
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04010
MAPK signaling pathway
setr04064
NF-kappa B signaling pathway
setr04071
Sphingolipid signaling pathway
setr04137
Mitophagy - animal
setr04141
Protein processing in endoplasmic reticulum
setr04210
Apoptosis
setr04217
Necroptosis
setr04380
Osteoclast differentiation
setr04621
NOD-like receptor signaling pathway
setr04622
RIG-I-like receptor signaling pathway
setr04657
IL-17 signaling pathway
setr04668
TNF signaling pathway
setr04920
Adipocytokine signaling pathway
setr04932
Non-alcoholic fatty liver disease
setr05010
Alzheimer disease
setr05014
Amyotrophic lateral sclerosis
setr05016
Huntington disease
setr05017
Spinocerebellar ataxia
setr05022
Pathways of neurodegeneration - multiple diseases
setr05132
Salmonella infection
setr05135
Yersinia infection
setr05160
Hepatitis C
setr05163
Human cytomegalovirus infection
setr05167
Kaposi sarcoma-associated herpesvirus infection
setr05168
Herpes simplex virus 1 infection
setr05169
Epstein-Barr virus infection
setr05170
Human immunodeficiency virus 1 infection
setr05200
Pathways in cancer
setr05203
Viral carcinogenesis
setr05222
Small cell lung cancer
setr05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126009254 (TRAF2)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
126009254 (TRAF2)
04064 NF-kappa B signaling pathway
126009254 (TRAF2)
04668 TNF signaling pathway
126009254 (TRAF2)
04071 Sphingolipid signaling pathway
126009254 (TRAF2)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
126009254 (TRAF2)
09143 Cell growth and death
04210 Apoptosis
126009254 (TRAF2)
04217 Necroptosis
126009254 (TRAF2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
126009254 (TRAF2)
04622 RIG-I-like receptor signaling pathway
126009254 (TRAF2)
04657 IL-17 signaling pathway
126009254 (TRAF2)
09152 Endocrine system
04920 Adipocytokine signaling pathway
126009254 (TRAF2)
09158 Development and regeneration
04380 Osteoclast differentiation
126009254 (TRAF2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
126009254 (TRAF2)
05203 Viral carcinogenesis
126009254 (TRAF2)
09162 Cancer: specific types
05222 Small cell lung cancer
126009254 (TRAF2)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
126009254 (TRAF2)
05160 Hepatitis C
126009254 (TRAF2)
05168 Herpes simplex virus 1 infection
126009254 (TRAF2)
05163 Human cytomegalovirus infection
126009254 (TRAF2)
05167 Kaposi sarcoma-associated herpesvirus infection
126009254 (TRAF2)
05169 Epstein-Barr virus infection
126009254 (TRAF2)
09171 Infectious disease: bacterial
05132 Salmonella infection
126009254 (TRAF2)
05135 Yersinia infection
126009254 (TRAF2)
09164 Neurodegenerative disease
05010 Alzheimer disease
126009254 (TRAF2)
05014 Amyotrophic lateral sclerosis
126009254 (TRAF2)
05016 Huntington disease
126009254 (TRAF2)
05017 Spinocerebellar ataxia
126009254 (TRAF2)
05022 Pathways of neurodegeneration - multiple diseases
126009254 (TRAF2)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
126009254 (TRAF2)
09167 Endocrine and metabolic disease
04932 Non-alcoholic fatty liver disease
126009254 (TRAF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126009254 (TRAF2)
04121 Ubiquitin system [BR:
setr04121
]
126009254 (TRAF2)
Enzymes [BR:
setr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126009254 (TRAF2)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
126009254 (TRAF2)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
126009254 (TRAF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
TRAF2_zf
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_5
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
DUF4795
Motif
Other DBs
NCBI-GeneID:
126009254
NCBI-ProteinID:
XP_049629618
LinkDB
All DBs
Position
5:21435556..21441464
Genome browser
AA seq
502 aa
AA seq
DB search
MAAAGVTPPASLDAQLPGFSKALLGARLEEKYLCSACRNVLRRPFQAQCGHRYCSRCLAG
ILSSGPQNCAACVHEGIYEEGVSVLESSSAFPDNAARREVESLPAVCPNQGCSWKGTLKD
YESGHEGHCPFMLTECPACKGLVRLCDREQHAGYECPERSLSCGHCQAPFCGADIKVHQE
TCPQFPLTCEGCSQKIPRHRFQEHGKMCGQGRVPCRFQAVGCPELVENEGQVEHEAQKLR
EHLVLLLSSLLETQRLMGPAQELPSAVELVQRCSSLERKTTTFENIVCVLNREVERAAMT
AEACGRQHRLDQERIEALSNKVQQLERTVGLKDLVIAELEQKVRELEASTHDGVFIWKIS
DFTRKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGPHD
ALLRWPFNQKVTLMLLDHNNREHVIDAFRPDVTSSSFQRPVSDMNIASGCPLFCPVSKME
AKNSYVRDDAIFIKAIVDLTGL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagccggcgtgactcctcctgcttccctggatgcgcagctgcccggattctcc
aaggcgctactgggcgcgaggctggaggagaagtacctgtgctcggcctgtaggaacgtg
ctgcggcggcctttccaggcccagtgtggccaccgctactgctcccgatgcctggctggc
atcctcagctctgggcctcagaactgtgctgcctgtgtgcacgagggcatctatgaggag
ggtgtctcagtgctggaaagcagctcggccttccccgacaatgctgcccgcagggaggtg
gagagcctgccagccgtctgtcccaaccaaggctgtagctggaaggggaccctaaaggac
tatgagagtggccacgagggccattgcccgttcatgctgaccgagtgcccagcgtgtaag
ggcctggtgcgtttgtgcgacagggagcagcatgcggggtacgaatgtccagaaaggagc
cttagctgcgggcactgccaggctcccttctgtggagctgacattaaggtgcaccaggaa
acctgtccccaattccccttgacctgcgagggctgcagccagaagatcccacgacacaga
ttccaggagcatgggaagatgtgtggccagggccgagtgccgtgcaggtttcaggctgtt
ggctgtcctgagctggtggaaaacgaggggcaggtggagcatgaggcacagaagcttcgg
gagcacctggtcctgttgctgagcagtcttctggagacccagcgcctcatgggcccggct
caggaactgccctcagccgtagaattggtgcagcgctgcagctctctggagcggaaaaca
accacctttgagaacattgtctgcgtcctaaaccgcgaggtggaaagggcggccatgact
gctgaggcctgtggccggcagcatcgcttggaccaagagcggattgaagccctaagtaac
aaggtgcagcagctagagaggactgtgggcctgaaggacctggtcatagccgagttggag
cagaaggtccgtgagctggaggcctccacccatgacggagtcttcatctggaagatttct
gacttcacccgcaagcgacaggaggcggtggctggccgcacgcctgctatcttctcccca
gccttctacaccagcaggtatggctacaagatgtgtctgcgcatctacctgaatggggat
ggcacgggccgcgggacccacctgtccctcttcttcgtggtgatgcggggcccccacgac
gccctcctgcggtggcctttcaaccagaaggtcacgctgatgctgctggaccacaacaac
cgcgagcatgtcatcgacgccttcaggcccgatgtgacctcatcatccttccagaggccg
gtcagtgacatgaacattgccagcggctgtccactcttctgccctgtctccaagatggag
gccaagaactcctatgtacgtgatgacgccatcttcatcaaggccattgtggacctcacg
gggctctag
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