Suncus etruscus (white-toothed pygmy shrew): 126009381
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Entry
126009381 CDS
T09902
Symbol
TRAF1
Name
(RefSeq) TNF receptor-associated factor 1
KO
K03172
TNF receptor-associated factor 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04064
NF-kappa B signaling pathway
setr04210
Apoptosis
setr04668
TNF signaling pathway
setr05200
Pathways in cancer
setr05202
Transcriptional misregulation in cancer
setr05203
Viral carcinogenesis
setr05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
126009381 (TRAF1)
04668 TNF signaling pathway
126009381 (TRAF1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
126009381 (TRAF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
126009381 (TRAF1)
05202 Transcriptional misregulation in cancer
126009381 (TRAF1)
05203 Viral carcinogenesis
126009381 (TRAF1)
09162 Cancer: specific types
05222 Small cell lung cancer
126009381 (TRAF1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
PilJ
MIC19_MIC25
XLF_CC
Motif
Other DBs
NCBI-GeneID:
126009381
NCBI-ProteinID:
XP_049629745
LinkDB
All DBs
Position
5:2419967..2435175
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AA seq
414 aa
AA seq
DB search
MASSSASNTRSAPDENEFPFGCAPTVCQDPPEPGLPLCCTVCLSVRKGKDQICPKCRGDA
TQTLSPGSLVSQEKEHPRMTEAEVECPFAGVGCSFKGNPKFMQEHEVASQAAHLNLLLEL
MKQWKAQLSSSLGSRPIAQEQNLSDLPLQAAVEVAGDLEVDCYRAPCSESQDTLALQHFM
KDKLLAELEEKLRVFENIVAVLNKEVEASQLALAASIHQSQLDREHILNLEERVLELQQT
LAQKDQALGKVEQGLHFMKEASFDGTFLWKITNVARRCQESASGRTISLISPAFYTAKYG
YKLCLRLYLNGDGTGKRTHLSLFIVIMKGEYDALLPWPFRNKVTFMLLDQNNREHAIDAF
RPDLGSASFQRPQSETNVASGCPLFFPLSRLQSPKHAYIKDDTMFIKCIVETSA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagctctgccagcaacacacgttcagctccggatgagaacgagtttcccttt
gggtgtgccccaaccgtctgccaggacccaccagagcccggcctgcctctctgctgcaca
gtctgtctctctgtgaggaaaggcaaggatcagatctgtcccaaatgccgaggggatgca
acccaaactttaagcccaggaagccttgtgtctcaggagaaggaacaccccaggatgacg
gaggctgaagttgagtgcccttttgcaggagttggctgttccttcaaggggaaccccaag
ttcatgcaggagcatgaggtcgcctcgcaggccgcccacctaaacctgctgctggagtta
atgaaacaatggaaggcccagctgagctccagcctgggctccaggcccatcgcccaagag
cagaatctgtcggacctgccgcttcaggcagctgtggaagtggctggggacctggaggtg
gactgctaccgggccccctgctccgagagccaagacacgctagccctgcagcatttcatg
aaagataagcttctggcagagctggaggagaaacttcgcgtgttcgagaacatcgtcgct
gtcctcaacaaggaggtggaggcctcacagctcgccctggctgcctccatccaccagagc
cagttggaccgcgagcacatcctgaacttggaagagagggttttggagctgcagcagact
ctggcacagaaggaccaggccctgggcaaggtggaacagggcctgcacttcatgaaggag
gcctcttttgatggcacgttcctgtggaagatcaccaatgtggccaggcggtgccaggaa
tcggccagtggcaggaccatcagcctcatctccccagctttctacacggccaagtacggc
tacaagttgtgccttcggttgtatctgaacggggatggcacagggaaaaggacgcacctg
tccctcttcattgtaataatgaaaggagaatacgatgctctgctgccgtggcctttccgg
aacaaggtcaccttcatgctgctggaccagaacaaccgagaacacgccatcgacgccttc
cggcctgacctgggctctgcatccttccagcggccccagagcgagaccaacgtggccagc
ggctgccctctcttcttcccgctcagccggctgcagtcccccaagcatgcctacatcaag
gatgacactatgttcatcaagtgcatcgtggaaaccagtgcttag
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