Suncus etruscus (white-toothed pygmy shrew): 126013418
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Entry
126013418 CDS
T09902
Symbol
PSEN2
Name
(RefSeq) presenilin-2 isoform X1
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04330
Notch signaling pathway
setr04722
Neurotrophin signaling pathway
setr05010
Alzheimer disease
setr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
126013418 (PSEN2)
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
126013418 (PSEN2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
126013418 (PSEN2)
05022 Pathways of neurodegeneration - multiple diseases
126013418 (PSEN2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
setr01002
]
126013418 (PSEN2)
Peptidases and inhibitors [BR:
setr01002
]
Aspartic peptidases
Family A22: presenilin family
126013418 (PSEN2)
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GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
126013418
NCBI-ProteinID:
XP_049632466
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Position
7:44271442..44297518
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AA seq
478 aa
AA seq
DB search
MLTFMASDSEDDVCDERMSLMSTESPIARGRQEARQSLEDGESPALWRGHESEEEQDDLD
HYIATGIPGRLPGLEEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVRFYTEKNGQLAA
PPAYPPGSLRVGTPETAGGNSVALPFSLSIYTPFTEDTPSVGQRLLNSVLNTLIMISVIV
IMTIFLVVLYKYRCYKFIHGWLIMSSMMLLFLFTYIYLGEVLKTYNVAMDYPTLLLTVWN
FGAVGMVCIHWKGPLMLQQAYLIMISALMALVFIKYLPEWSAWVILGAISVYDLVAVLCP
KGPLRMLVETAQERNEPIFPALIYSSAMVWTVGMAKLDTSSQGALQLPFDPEMEEDSYDS
FGDPSYPEVFEPPLPGYPGEELEEEEERGVKLGLGDFIFYSVLVGKAASTSSGDWNTTLA
CFVAILIGLCLTLLLLAVFKKALPALPISITFGLIFYFSTDNLVRPFMDTLASHQLYI
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgctcacgtttatggcctctgacagtgaggacgacgtatgtgacgagcggatgtctctg
atgtcgaccgagagtcccatagcacgtggccgccaggaagccaggcagagcctggaagat
ggcgaaagtcctgctctgtggagaggccacgagagtgaggaggagcaggatgaccttgac
cactacattgccactggcatccctgggcgcctcccaggcctggaggaagagctgaccctc
aagtatggagcaaagcacgtgatcatgctcttcgtgcccgtcaccctgtgcatggttgtg
gtggtggccaccatcaagtcagtgcgcttctacacggagaagaatgggcagctggcagca
ccacccgcctatcccccaggctccctcagggtggggacaccagagacggcaggagggaat
tccgtagccctgcccttctctctcagcatctacaccccattcaccgaggacacgccctct
gtgggccagcgcctgctcaactctgtgctcaacaccctcatcatgatcagcgtcatcgtg
atcatgaccatcttcctggtcgtgctctataagtaccgctgctacaagtttatccatgga
tggctgatcatgtcctcaatgatgttgctgtttctcttcacctacatctacctcggagaa
gtgctcaagacctacaatgtggccatggactaccccaccctcctcctgaccgtgtggaac
ttcggggcagtgggcatggtgtgcatccactggaagggacccctgatgctgcagcaggct
tacctcatcatgatcagcgcactcatggccttggtgttcatcaagtacctccccgagtgg
tcagcgtgggtcatcctgggggccatctctgtgtatgatcttgtggctgtgctgtgcccc
aaagggccactgagaatgctggtggaaacggcccaggaaaggaatgaacccatatttcct
gctctgatatactcatctgccatggtatggacagtgggcatggccaagctggatacctcc
tctcagggagccctgcagctcccctttgaccccgagatggaggaagactcctatgatagt
tttggagatccctcataccctgaagtctttgaaccaccgctgcctggctatcctggggaa
gagctggaggaagaggaagaaaggggcgtgaagctcggcctcggggatttcatcttctac
agtgtgctggtgggcaaggcagcctccacgagcagcggggactggaacaccacactggcc
tgctttgtggccatcctcatcggtttgtgtctgaccctactgctgctcgccgtgttcaag
aaggcactgcccgcactccctatctccatcaccttcgggctcatcttctacttctccaca
gacaaccttgtgcgccctttcatggataccttggcctcccatcagctctacatctga
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