Suncus etruscus (white-toothed pygmy shrew): 126013428
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Entry
126013428 CDS
T09902
Symbol
PBX1
Name
(RefSeq) pre-B-cell leukemia transcription factor 1 isoform X1
KO
K09355
pre-B-cell leukemia transcription factor 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04148
Efferocytosis
setr04927
Cortisol synthesis and secretion
setr04934
Cushing syndrome
setr05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
126013428 (PBX1)
09150 Organismal Systems
09152 Endocrine system
04927 Cortisol synthesis and secretion
126013428 (PBX1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
126013428 (PBX1)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
126013428 (PBX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126013428 (PBX1)
Transcription factors [BR:
setr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
126013428 (PBX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
HTH_3
DUF7260
UCH
LZ3wCH
EF-hand_2
Motif
Other DBs
NCBI-GeneID:
126013428
NCBI-ProteinID:
XP_049632481
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Position
7:61077458..61201988
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AA seq
430 aa
AA seq
DB search
MDEQPRLMHAHAGVGMAGHPGLSQHLPDGAGGTEGEGGRKQDIGDILQQIMTITDQSLDE
AQARKHALNCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAGP
EKGGGSAAAAAAAAASGGAGSDNSVEHSDYRAKLSQIRQIYHTELEKYEQACNEFTTHVM
NLLREQSRTRPISPKEIERMVSIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNF
NKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQE
EANIYAAKTAVTATSVSAHGSQANSPSTPNSAGSSSSFNMSNSGDLFMSVQSLNGESYQG
AQVGANVQSQVDTLRHVISQTGGYSDGLAASQMYSPQGLNANGGWQDATTPSSVTSPTEG
PGSVHSDTSN
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcagccgaggctgatgcatgcccacgccggggtggggatggccggacacccg
ggcctgagccaacacttgccggacggggccggagggacggagggggagggcgggaggaag
caggacatcggggacatcttacagcaaataatgaccatcaccgaccagagtttggacgag
gcgcaggccagaaaacacgctttgaactgccaccgaatgaagcctgccttgttcaacgtg
ctgtgtgaaatcaaagaaaagacagtgttgagtatccggggagcccaggaggaggagccc
acagacccgcagctcatgcgcctggacaacatgctgctggctgagggcgtggcaggccct
gagaagggcgggggttcggctgctgcagctgctgcagcagcagcttccggcggagctggt
tcggacaactcagtggagcactcagactatcgggccaaactctcccagatacggcagatc
taccacacagagctggagaaatacgaacaggcctgcaacgagttcaccacccacgtgatg
aacctgctgcgcgagcagagccggacccggcccatctctccaaaggagatcgagcggatg
gtgagcatcatccaccgcaagttcagctccatccagatgcagctcaagcagagcacatgt
gaggccgtcatgatcctgcgctcaaggttcctggacgcacggcggaagagacgaaacttc
aacaagcaggcgacagaaatcctgaacgaatatttctattcccatctcagcaacccttat
cccagtgaggaggccaaagaggagttagccaagaagtgcggcatcaccgtgtcccaggta
tcaaactggtttggaaataaacgaatccggtacaaaaagaacatcgggaaattccaggag
gaagcgaacatctacgccgccaagacggctgtcacagccaccagtgtctcggcacatggc
agccaggccaactcgccctccacccccaactcagccggttcttccagctcttttaacatg
tccaactctggagacttgttcatgagcgtgcagtcactcaatggggaatcttaccaaggg
gcccaggtcggagccaacgtacagtcacaggtggatactcttcgccatgttatcagccag
acaggaggatacagtgatggactcgcagccagccagatgtacagtccacaaggcctcaac
gctaatggaggctggcaggacgccaccaccccctcatccgtcacttcccccacagaaggc
ccgggcagcgttcactccgatacctccaactga
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