Suncus etruscus (white-toothed pygmy shrew): 126015660
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Entry
126015660 CDS
T09902
Symbol
SQSTM1
Name
(RefSeq) sequestosome-1 isoform X1
KO
K14381
sequestosome 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04137
Mitophagy - animal
setr04140
Autophagy - animal
setr04217
Necroptosis
setr04218
Cellular senescence
setr04380
Osteoclast differentiation
setr05014
Amyotrophic lateral sclerosis
setr05022
Pathways of neurodegeneration - multiple diseases
setr05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
126015660 (SQSTM1)
04137 Mitophagy - animal
126015660 (SQSTM1)
09143 Cell growth and death
04217 Necroptosis
126015660 (SQSTM1)
04218 Cellular senescence
126015660 (SQSTM1)
09150 Organismal Systems
09158 Development and regeneration
04380 Osteoclast differentiation
126015660 (SQSTM1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
126015660 (SQSTM1)
05022 Pathways of neurodegeneration - multiple diseases
126015660 (SQSTM1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
126015660 (SQSTM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126015660 (SQSTM1)
03029 Mitochondrial biogenesis [BR:
setr03029
]
126015660 (SQSTM1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
setr04147
]
126015660 (SQSTM1)
Membrane trafficking [BR:
setr04131
]
Autophagy
Mitophagy
Cargo receptors
126015660 (SQSTM1)
Pexophagy
126015660 (SQSTM1)
Aggrephagy
126015660 (SQSTM1)
Xenophagy
126015660 (SQSTM1)
ER-phagy
ER-phagy recepters
126015660 (SQSTM1)
Other autophagy associated proteins
Midbophagy
126015660 (SQSTM1)
Mitochondrial biogenesis [BR:
setr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
126015660 (SQSTM1)
Exosome [BR:
setr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
126015660 (SQSTM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Motif
Other DBs
NCBI-GeneID:
126015660
NCBI-ProteinID:
XP_049634213
LinkDB
All DBs
Position
8:complement(32934025..33413064)
Genome browser
AA seq
443 aa
AA seq
DB search
MASFTVKAYLLGKEDSVREIRRFSFSVGAEAEAEAEAAGARPCERLLARIAALFPALRPG
GFQAHYRDEDGDLVAFSSEEELNMALTYVKDGLFRVYIKERKECRREHRPPCAQDGAPRN
LVHPNVICDGCNGPVVGTRFKCSVCPDYDLCAACEGKGLHQEHAKLTFPGFVGHLSEGFA
HSRWLRKLKHGHFGWPSWEMGPPGNWSPRPPRAGDTRASPSAAAPTEDAASVGPSEDPGM
NFLKNVGESVAAALSPLGIEVDIDMEHGGKRSRLTRGSFSVDKADPPACSDSPNAGQPSG
DNNGSATVSLVEQMNKIVLESGLPSEVQVESDTGSGGDDDWTHLSSKEVDPSTGELQSLQ
MPDSAGPSSLDPSQEGPTGLKEAAVYPHLPPEADPRLIESLSQMLSMGFSDEGGWLTRLL
QTKNGDIGAALDAIQYSKHPGPL
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgttcacggttaaggcctacctgctgggcaaggaggattcggtgcgcgagatt
cgccgcttcagcttcagcgtgggcgccgaggccgaagccgaggccgaagcggcgggggcc
cggccctgcgagcggctgctggcccggatagccgcgctcttccccgcgctccggcccggc
ggcttccaggcgcactaccgcgatgaggacggggacttggtggccttctccagcgaagag
gagttgaacatggctttgacctacgtgaaagatggcctcttccgtgtttacatcaaagag
aggaaggaatgccgacgggaacaccgccctccctgtgctcaggatggtgcaccccgcaac
ttggtgcaccccaatgtgatctgtgatggctgcaatggtccggtagtggggacccggttc
aaatgtagcgtttgcccagactacgacctgtgtgccgcctgtgaggggaagggcctgcac
caggagcatgccaagctgaccttcccaggttttgtggggcacctctcagagggcttcgca
catagccgttggctccgaaagctgaagcatggccattttgggtggcccagctgggagatg
gggccccctggcaactggagcccacgaccccctcgagcaggagatacgcgggctagtcct
tcagcagcagcaccaactgaagatgcagccagcgtgggcccctcagaggacccaggcatg
aacttcctcaagaatgttggggagagtgttgctgccgcccttagtcctctgggcatcgaa
gtggatattgacatggagcacggtgggaagaggagccgcctgactcgcggaagcttcagc
gttgacaaggcggacccaccagcctgcagtgactcccctaatgctggccagcccagcggg
gacaacaatgggagtgccacggtgtccctggtggaacagatgaacaagattgtcctggaa
tcaggactgccttctgaggttcaggtggagtcggacacaggctcgggaggcgacgatgac
tggacacatctgtcatccaaggaggtggacccttccacaggtgagctccagtctctgcag
atgcccgactcggcgggccccagctctctggacccttcccaggagggccccacgggcctg
aaggaggcagcagtgtacccacatctgccaccagaagctgacccgaggctgatagagtca
ctgtcacagatgctatccatgggcttctctgacgagggtggttggctgacccgcctcctg
cagaccaagaatggtgacatcggggctgcactggatgccatccagtactccaagcacccg
gggcctttgtga
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