Suncus etruscus (white-toothed pygmy shrew): 126016079
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Entry
126016079 CDS
T09902
Symbol
MMP13
Name
(RefSeq) LOW QUALITY PROTEIN: collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04657
IL-17 signaling pathway
setr04926
Relaxin signaling pathway
setr04928
Parathyroid hormone synthesis, secretion and action
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
126016079 (MMP13)
09152 Endocrine system
04926 Relaxin signaling pathway
126016079 (MMP13)
04928 Parathyroid hormone synthesis, secretion and action
126016079 (MMP13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
setr01002
]
126016079 (MMP13)
Peptidases and inhibitors [BR:
setr01002
]
Metallo peptidases
Family M10
126016079 (MMP13)
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Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
DUF4953
Peptidase_M54
Reprolysin_5
Motif
Other DBs
NCBI-GeneID:
126016079
NCBI-ProteinID:
XP_049634564
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Position
8:6418425..6431408
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AA seq
470 aa
AA seq
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MPKMLAGILAAFLLLSYTHCRALPLPAGDEDDTDLSEENLEVAKVHLKNYYQPLRPTGAP
QKRSLEDKVREMQTFFGLEATGKLDDNTLEIMKRPRCGVPDVGEFNVFFRSPKWPRTNLT
YRIVNYTPDLPPAKVDYALKKSLKVWSDVXPLTFTRLYSGTADIMISFEPRVHGDSYPFD
GPDGLLAHAFAPGPNYGGDVHFDEDERWTNSAKDYNLFLVAVHEFGHSIGLEHSNDPGSV
MFPVYSFTEEFILPYDDVEGVHYLYGPGKEDPNIVHPKTPTNCDSNLSFDAVTGLRGETI
VFKDRFFWRLHPQQYNPELFLIKSFWPELPNNLDAAYEEPSQDVFFVFKGKQFWALKAYD
IVRGYPQKLQELGFPNEVESISAAVHLPRAGKTFFFSGNQVWRYDEINRKMDEEYPRLIN
EEFSGIGDIVDAAYERNGYIYFFKGTTQFEYRITDDYVTRIMTTNSFVWC
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagatgcttgcaggcatccttgctgcctttctcctcctcagctacactcactgc
agggccctgccgcttcctgctggtgatgaggatgataccgatttgtctgaggaaaactta
gaggttgcaaaggtacatttaaaaaactactaccagcctctgaggcccacaggggccccc
cagaagaggtccctggaagacaaggtccgagaaatgcagactttcttcggcttagaggcg
acaggcaaattggatgacaacacactggagattatgaagaggccgagatgcggagtccct
gatgtgggtgaattcaatgttttctttcggtcacccaaatggcccagaacgaacttaacc
tacagaattgtgaactacacccctgatctgcctccagcaaaggtcgactatgccctcaaa
aaaagccttaaggtctggtctgatgtgnagcctttgaccttcactagactttacagtggc
accgctgatatcatgatctcttttgaacctagagtgcatggagactcctacccatttgat
ggacccgatggcctactggctcatgcttttgctcctggaccaaattacggaggagatgtc
cattttgatgaagatgaaagatggacaaatagtgccaaagattacaatttgtttctcgtg
gccgtccatgagtttggacattctataggacttgagcattccaatgatccaggatcagtc
atgttccccgtctattccttcactgaagaatttatacttccttatgatgatgtagaaggg
gtccactatctctatggtccaggaaaagaagaccccaacattgtgcaccccaaaacacct
accaactgtgattctaacttatcctttgatgccgttactggtctccgaggagaaactatt
gtttttaaagacagattcttctggcgcttgcatcctcagcagtataacccggagctgttt
ttaatcaagtcattctggcctgaactccctaacaatcttgacgcagcctacgaggagcct
tctcaagatgtgttctttgtcttcaaaggcaaacaattttgggctctgaaggcctacgac
atagtgagaggctacccccaaaaattacaagaactgggctttccgaatgaggtagagagc
atcagtgcagctgtccacttaccgagggcaggcaagactttcttcttctccggaaaccag
gtttggaggtatgatgaaattaatcgtaaaatggatgaagagtaccccagactgataaat
gaagaattttcaggaatcggtgacattgtggatgctgcctatgagagaaatggttatatt
tattttttcaagggaactacccagtttgaatatcgcatcacggatgactatgttactcgg
ataatgacaacaaattcctttgtgtggtgttaa
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