KEGG   Suncus etruscus (white-toothed pygmy shrew): 126016198
Entry
126016198         CDS       T09902                                 
Symbol
RB1
Name
(RefSeq) retinoblastoma-associated protein isoform X1
  KO
K06618  retinoblastoma-associated protein
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr01522  Endocrine resistance
setr04110  Cell cycle
setr04218  Cellular senescence
setr04934  Cushing syndrome
setr05160  Hepatitis C
setr05161  Hepatitis B
setr05163  Human cytomegalovirus infection
setr05165  Human papillomavirus infection
setr05166  Human T-cell leukemia virus 1 infection
setr05167  Kaposi sarcoma-associated herpesvirus infection
setr05169  Epstein-Barr virus infection
setr05200  Pathways in cancer
setr05203  Viral carcinogenesis
setr05207  Chemical carcinogenesis - receptor activation
setr05212  Pancreatic cancer
setr05214  Glioma
setr05215  Prostate cancer
setr05218  Melanoma
setr05219  Bladder cancer
setr05220  Chronic myeloid leukemia
setr05222  Small cell lung cancer
setr05223  Non-small cell lung cancer
setr05224  Breast cancer
setr05225  Hepatocellular carcinoma
setr05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:setr00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    126016198 (RB1)
   04218 Cellular senescence
    126016198 (RB1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    126016198 (RB1)
   05207 Chemical carcinogenesis - receptor activation
    126016198 (RB1)
   05203 Viral carcinogenesis
    126016198 (RB1)
  09162 Cancer: specific types
   05212 Pancreatic cancer
    126016198 (RB1)
   05225 Hepatocellular carcinoma
    126016198 (RB1)
   05226 Gastric cancer
    126016198 (RB1)
   05214 Glioma
    126016198 (RB1)
   05220 Chronic myeloid leukemia
    126016198 (RB1)
   05218 Melanoma
    126016198 (RB1)
   05219 Bladder cancer
    126016198 (RB1)
   05215 Prostate cancer
    126016198 (RB1)
   05224 Breast cancer
    126016198 (RB1)
   05222 Small cell lung cancer
    126016198 (RB1)
   05223 Non-small cell lung cancer
    126016198 (RB1)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    126016198 (RB1)
   05161 Hepatitis B
    126016198 (RB1)
   05160 Hepatitis C
    126016198 (RB1)
   05163 Human cytomegalovirus infection
    126016198 (RB1)
   05167 Kaposi sarcoma-associated herpesvirus infection
    126016198 (RB1)
   05169 Epstein-Barr virus infection
    126016198 (RB1)
   05165 Human papillomavirus infection
    126016198 (RB1)
  09167 Endocrine and metabolic disease
   04934 Cushing syndrome
    126016198 (RB1)
  09176 Drug resistance: antineoplastic
   01522 Endocrine resistance
    126016198 (RB1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:setr01009]
    126016198 (RB1)
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:setr03000]
    126016198 (RB1)
Protein phosphatases and associated proteins [BR:setr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     126016198 (RB1)
Transcription factors [BR:setr03000]
 Eukaryotic type
  Other transcription factors
   Pocket domain Rb
    126016198 (RB1)
SSDB
Motif
Pfam: Rb_C RB_A RB_B DUF3452 STK_08120-like
Other DBs
NCBI-GeneID: 126016198
NCBI-ProteinID: XP_049634719
LinkDB
Position
8:60271498..60421815
AA seq 922 aa
MPPKSHRRAAAAAEPPVPPPPPPEEDAEPDSGPEDLPLARLEFEETEDPDFTALCQILKI
PDHVRERAWLTWDKISSVDGILEDSIQKKKELWGICIFIAAVDLDEIPFTFTELQKNTET
SVYKFFDLLKEIDTSIKVDNAMSRLLNKYNVLCALYSKLERTCELIYLTQSSSSITTEIN
SVLVLKVSWITFLLAKGEVLQMEDDLVISFQLMLCVLDYFIKLSPPALLKEPYKTAVIPI
NGSPRTPRRGQNRSARIAKQLENDTRIIEVLCKEHECNIDEVKNVYFKNFIPFMNSLGIV
PSNGLPEVESLSKQYEEIYLKNKDLDARLFLDHDKTLQADPIDSLEMQRTPRKNNPEEDM
HLIPPQTPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKENILKRVKDIGYIF
KEKFAKAVGQGCMEIGLQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDSIFHMSL
LACALEVVMATYSRTMSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANLTREM
IKHLERCEHQIMESLAWLSDSPLFDLLKQAKDREGPADHLESACNLTLPFQNNHTPADMY
LSPSKSPKKKGSTTHQNSTANAEAQATSTPQTQKPLKLTSLSLFYKKVYRLAYLRLNTLC
ARLLSNHPELEHIIWTLFQHTLQNEYELMKDRHLDQIMMCSMYGICKVKNIDLKFKIIVT
AYKDLPHAVQETFKRVLIREEEYDSIIVFYNSVFMQRLKTNILQYASTRPPALSPIPHIP
RSPYNFSSSPLRIPGGNIYISPLKNPYKISEGLPTPTKMTPRTRILVSIGESFGTSEKFQ
KINQMVCNSDRVLKRSAEGSNPPKPLKKLRFDIDGTDEADGSKHLPGESKFQQKLAEMTS
TRTRMQKQKMNDSMDTSNKEEK
NT seq 2769 nt   +upstreamnt  +downstreamnt
atgccgcctaaaagccaccgacgagcagccgccgccgccgaaccccccgtgcccccgcca
cccccgcccgaggaggacgcggagccggacagcggccccgaggacctgcctctggccagg
cttgagtttgaagaaaccgaagatcctgattttactgcattatgtcaaatactaaagata
ccagatcacgtgagagaaagagcttggttaacgtgggataaaatttcatctgtggatggg
atattggaagattctattcagaagaaaaaagaactgtggggaatctgtatctttattgca
gcagttgatctagatgagataccattcactttcacagaactacagaaaaatacagaaacc
agtgtctataaattctttgatttactgaaagaaattgataccagtatcaaagttgataat
gcaatgtcaagactgttgaacaagtacaatgtattgtgtgcactctacagcaaactagaa
agaacgtgtgagcttatctacttaacacagtccagcagttcgataacaactgaaataaac
tctgtattggtgctgaaagtttcttggatcacatttctactagctaaaggggaagtatta
caaatggaagatgatcttgtgatctcctttcagttaatgttgtgtgtccttgactatttt
atcaaactctctcctcctgcattgctcaaagaaccatataaaacagctgttatacctatt
aatggctcacctcggacaccaaggagaggtcagaataggagtgcacggatagcaaaacaa
ctagaaaatgatacaagaattattgaagttctctgtaaagaacatgaatgtaatatagat
gaggtgaaaaatgtttatttcaagaattttatacctttcatgaattctcttggaattgta
ccttctaatggacttccagaggtggaaagtctctctaaacaatatgaagaaatttacctt
aaaaataaagatttggatgcaagattatttttggatcatgataaaacacttcaggctgat
cccatagacagtttagaaatgcagagaacaccacgcaaaaataatcccgaagaagatatg
catttgattcctccacagactccagttagaactgttatgaatactattcaacaattaatg
atgatcttaaattcagcaagtgatcaaccatcagaaaatctaatttcctattttaataac
tgcacagttaatccaaaggaaaatatcttgaaaagagtaaaggatattggatacatcttt
aaagaaaaatttgctaaagcagtaggacagggatgtatggagattggattgcagcgatac
aaacttggagtacgattgtattatcgagtaatggaatccatgcttaaatcagaagaagaa
cgattatccattcaaaattttagcaaactcctgaatgacagcatctttcatatgtctttg
ttggcgtgtgctcttgaagtcgtaatggctacatatagcagaactatgtctcagaatctt
gattctggaacagatttgtcctttccatggattctgaatgtacttaatttaaaagctttt
gatttttacaaagtgattgaaagttttataaaagcagaagccaatttgaccagagaaatg
ataaaacatttagaacgatgtgaacatcaaatcatggaatcccttgcatggctctctgat
tcacctttatttgatctccttaaacaagcaaaagaccgggagggaccagctgatcacctt
gaatctgcttgtaatctcacccttccttttcagaataaccacactccagcagatatgtat
ctttctccttcaaaatctccaaagaaaaaagggtcaactacacatcaaaattctactgca
aatgcagaggctcaagcaacttcaactccccagactcagaagccattgaaacttacctcc
ctttcactgttttataaaaaagtttaccgtttagcatatcttcgactcaataccttgtgt
gcacgccttctctccaaccacccagaactagaacacatcatctggaccctttttcagcac
accctgcaaaatgagtatgaactcatgaaagacaggcatttggaccagattatgatgtgt
tccatgtatggtatatgcaaagtgaagaatatagaccttaagttcaaaattattgtaaca
gcatacaaagatcttcctcacgctgttcaggagacattcaaacgtgttttgattagagaa
gaggaatatgactccattatagtattctataattcagtcttcatgcagagactgaaaaca
aatattttacagtatgcttctacaaggccccctgccttgtctccaatacctcacattcct
cggagtccttacaatttttctagttcacctttgcggattcctggggggaatatctatata
tcacccctaaagaacccatataaaatttcagaaggtctgccaacaccaacaaaaatgact
ccaaggacaagaatcttagtatcaattggtgaatcatttgggacttctgagaagttccag
aaaataaatcagatggtgtgcaacagtgaccgagtgctcaaaaggagtgcagagggaagc
aaccctcctaagccactgaaaaaattgcgctttgatatcgatggaactgatgaagcagat
ggaagtaaacatctcccaggcgagtccaaattccaacaaaaactggccgaaatgacatct
acacgaacacgaatgcaaaagcagaaaatgaatgacagcatggatacttcaaacaaggaa
gaaaagtga

DBGET integrated database retrieval system