Suncus etruscus (white-toothed pygmy shrew): 126017457
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Entry
126017457 CDS
T09902
Name
(RefSeq) LOW QUALITY PROTEIN: ataxin-3-like
KO
K11863
Ataxin-3 [EC:3.4.22.-]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04141
Protein processing in endoplasmic reticulum
setr05017
Spinocerebellar ataxia
setr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126017457
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
126017457
05022 Pathways of neurodegeneration - multiple diseases
126017457
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
setr01002
]
126017457
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126017457
Peptidases and inhibitors [BR:
setr01002
]
Cysteine peptidases
Family C86
126017457
Ubiquitin system [BR:
setr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MJD
126017457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Josephin
SUIM_assoc
UIM
UIM_2
Motif
Other DBs
NCBI-GeneID:
126017457
NCBI-ProteinID:
XP_049635354
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Position
9:complement(19520017..19521336)
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AA seq
378 aa
AA seq
DB search
MESIFHEKQESSLCAQHCLNNLLQGEYFSPVELSSIAQQLDEEERMRMAEGGITNEDNRT
FLQQPSENMDDSEFFSIQVISNALKVWGLXLILFNSPEYQRLRINPINEKSLICNYKEHW
FTVRKLGKQWFNLNSLLTGPELISDTYLKLFLAQLQQKGYSIFVVKGDLSDCEADQLLQM
VRVQQMQRPKLIGEKLAQMKEQRLQKTDLERVSENNEDSVADEEEEDLQKALALSRQEID
LEDEEADFRRAIQLSMQGSSRNLRQDVPHTLGPHLTSEELQKRREAYFEKQPQHQQQDLT
RQQVHPCERPTTNSDAVGSDLVDSMNEKDMLQAAVTMSLETVRNNSKQKKKKNTFQNLIR
YSYFPTFSCVTVATGPFW
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggagtccatcttccacgagaaacaagaaagctcactctgtgctcagcattgcttgaat
aatctattgcaaggagaatattttagccctgtggaattatcttcaattgcacagcaactg
gatgaagaagagagaatgcggatggcagaaggaggcattactaatgaagacaaccgcacg
tttttacagcagccttctgaaaatatggatgacagtgaatttttttctattcaagttata
agcaatgccttgaaagtttggggtttataacttatcctattcaacagtccagagtatcag
aggctcaggattaatccaataaatgaaaagtcacttatatgcaattataaagagcactgg
tttacagttagaaagttaggaaaacagtggttcaacttgaattctctcttgacgggtcca
gaactaatatcagatacataccttaaacttttcttggctcagttacaacagaaaggttat
tctatatttgttgttaagggtgatctgtcagactgtgaagctgaccaacttctacagatg
gtcagggtccagcagatgcagagaccaaaattgattggagaaaaattagcacagatgaag
gaacagagattacagaagactgatcttgagcgagtctcagaaaataatgaagattcagtg
gcagatgaagaggaggaagatctgcagaaggctctagcactaagtcgccaagagattgac
ctggaagatgaagaagcagatttccgcagggctattcagctcagcatgcaaggtagttct
agaaatctacgccaagatgttccacacactttaggaccacatctcacttcagaagagcta
cagaaaagaagagaagcctactttgaaaagcagccgcaacatcagcagcaggaccttacc
aggcaacaagttcacccttgtgaaaggccgaccaccaactccgatgccgttggcagtgat
ctagttgattctatgaatgaaaaagatatgcttcaggcagctgtgactatgtctttagaa
actgtgagaaataattcaaaacagaagaagaagaagaatacctttcaaaatcttattaga
tattcatactttccaacattctcctgtgtgactgttgcaacgggtccattttggtaa
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