KEGG   Suncus etruscus (white-toothed pygmy shrew): 126017923
Entry
126017923         CDS       T09902                                 
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04010  MAPK signaling pathway
setr04064  NF-kappa B signaling pathway
setr04120  Ubiquitin mediated proteolysis
setr04140  Autophagy - animal
setr04144  Endocytosis
setr04380  Osteoclast differentiation
setr04620  Toll-like receptor signaling pathway
setr04621  NOD-like receptor signaling pathway
setr04622  RIG-I-like receptor signaling pathway
setr04657  IL-17 signaling pathway
setr04722  Neurotrophin signaling pathway
setr04936  Alcoholic liver disease
setr05132  Salmonella infection
setr05133  Pertussis
setr05135  Yersinia infection
setr05140  Leishmaniasis
setr05142  Chagas disease
setr05145  Toxoplasmosis
setr05152  Tuberculosis
setr05160  Hepatitis C
setr05161  Hepatitis B
setr05162  Measles
setr05168  Herpes simplex virus 1 infection
setr05169  Epstein-Barr virus infection
setr05170  Human immunodeficiency virus 1 infection
setr05171  Coronavirus disease - COVID-19
setr05200  Pathways in cancer
setr05222  Small cell lung cancer
setr05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
setr05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:setr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    126017923 (TRAF6)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    126017923 (TRAF6)
   04064 NF-kappa B signaling pathway
    126017923 (TRAF6)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    126017923 (TRAF6)
   04140 Autophagy - animal
    126017923 (TRAF6)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    126017923 (TRAF6)
   04621 NOD-like receptor signaling pathway
    126017923 (TRAF6)
   04622 RIG-I-like receptor signaling pathway
    126017923 (TRAF6)
   04657 IL-17 signaling pathway
    126017923 (TRAF6)
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    126017923 (TRAF6)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    126017923 (TRAF6)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    126017923 (TRAF6)
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    126017923 (TRAF6)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    126017923 (TRAF6)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    126017923 (TRAF6)
   05161 Hepatitis B
    126017923 (TRAF6)
   05160 Hepatitis C
    126017923 (TRAF6)
   05171 Coronavirus disease - COVID-19
    126017923 (TRAF6)
   05162 Measles
    126017923 (TRAF6)
   05168 Herpes simplex virus 1 infection
    126017923 (TRAF6)
   05169 Epstein-Barr virus infection
    126017923 (TRAF6)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    126017923 (TRAF6)
   05135 Yersinia infection
    126017923 (TRAF6)
   05133 Pertussis
    126017923 (TRAF6)
   05152 Tuberculosis
    126017923 (TRAF6)
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    126017923 (TRAF6)
   05140 Leishmaniasis
    126017923 (TRAF6)
   05142 Chagas disease
    126017923 (TRAF6)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    126017923 (TRAF6)
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    126017923 (TRAF6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:setr04131]
    126017923 (TRAF6)
   04121 Ubiquitin system [BR:setr04121]
    126017923 (TRAF6)
Enzymes [BR:setr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     126017923 (TRAF6)
Membrane trafficking [BR:setr04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    126017923 (TRAF6)
Ubiquitin system [BR:setr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    126017923 (TRAF6)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-TRAF_2 zf-C3HC4_3 zf-C3HC4_4 zf-RING_5 TRAF3_RING RING_XB3-XBAT31 zf-RING_11 SlyX U-box DUF3450 DUF16 Rhabdo_ncap_2 PspA_IM30 DUF4455 Filament Spc29 ATG16 ABC_tran_CTD Med21 Nuf2_DHR10-like DUF7607
Other DBs
NCBI-GeneID: 126017923
NCBI-ProteinID: XP_049635943
LinkDB
Position
9:complement(86715111..86731749)
AA seq 541 aa
MSLLNCENSCASSQSESDCCAAMTSSCSAAAKDDSMNTTASTGNLSSSFMEEIQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMNCSQCQRRFPKYQNHVHTHS
ECPRRQVSCENCLVSMPFEEKEVHDENCPLANVICEYCNTMLIREQMPNHYDLDCPVAPI
PCTFSAFGCPAKMQRNHLARHLQENTQLHMRMMAQAVQNLSLALAPMPQPDLHPYEPSCA
SQASSGCHPEVQNFQETIQQLEGRLVRQDHQIRELTAKMETQSIYVNDLKRTIRALEDKV
TEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQ
RCANYISLFVHIMQGEYDSHLPWPFQGTIRLTILDQSDVPIRQNHEEIMDSKPELLAFQR
PTIARNPKGFGYVTFMHLEALRQRTFVKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDAG
V
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgagtctgctaaactgtgaaaacagctgtgcgtccagccagtctgagagtgactgctgc
gctgccatgaccagctcctgtagcgctgcagcaaaagatgacagcatgaacacaacagcc
agcacggggaacctctcgagctcttttatggaagagatccagggatatgatgtggaattt
gacccgcccctggaaagcaagtatgagtgccccatctgcttgatggcattacgggaagca
gtgcaaacaccatgtggccacaggttctgcaaagcctgcattatcaagtcaatcagggat
gcaggtcacaaatgtccagttgataatgaaatattactggaaaatcaactatttcctgac
aattttgcaaaacgagagattctttctttgatggtaaaatgtccaaatgaaggttgtttg
cacaaaatggaactgaggcatcttgaggatcatcaagcacattgtgaatttgctcttatg
aattgttcccagtgccagcgtcgcttccccaaatatcagaaccatgttcacactcacagt
gaatgtccaagaagacaggtttcttgtgaaaactgtcttgtgtcaatgccatttgaagag
aaagaggtccatgatgagaactgtcctttggcaaatgtcatttgtgaatactgcaatacc
atgctcatcagagaacagatgcctaatcattatgatcttgattgtcctgttgccccaatt
ccatgcacgtttagtgcttttggttgccctgcaaagatgcagaggaatcacttggcacgc
cacctccaagagaatactcagttgcacatgagaatgatggcccaggctgttcagaatcta
agccttgccttagctcccatgccccagcctgatctccatccctatgagccttcctgtgca
tctcaggcttcctctgggtgtcacccagaggtccagaatttccaagaaaccattcaacag
ttagagggtcgccttgtaagacaagaccatcaaatccgagagcttactgctaaaatggaa
actcagagtatctatgtaaatgatctcaagcgaactatccgtgccctcgaggacaaagtt
actgaaatagaagcacagcagtgcaatgggatttacatctggaagattggcaactttggg
atgcacttgaaatctcaggaagaggagaaacctgttgtcattcacagccctggcttctac
acaggcaaacccggatacaaactttgcatgcgtctgcaccttcagttaccaactgctcaa
cgctgtgcaaactatatctctctctttgtccacataatgcaaggagaatatgacagccat
cttccttggcccttccaaggtacaatacgccttacaattcttgatcagtctgatgtacct
ataagacaaaatcatgaagaaattatggattccaaaccagagctgcttgcattccagaga
cccacaatcgcccggaacccaaaaggttttggctatgtgacttttatgcatctggaagcc
ttaagacaaaggacctttgttaaggatgatactctgttagtacgctgtgaggtctctacc
cggtttgatatgggtagtcttcggagagaaggttttcagccacgaagtactgatgcaggg
gtataa

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