Suncus etruscus (white-toothed pygmy shrew): 126018092
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Entry
126018092 CDS
T09902
Symbol
SPTBN2
Name
(RefSeq) spectrin beta chain, non-erythrocytic 2 isoform X1
KO
K23932
spectrin beta, non-erythrocytic 2
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04517
IgSF CAM signaling
setr04820
Cytoskeleton in muscle cells
setr05017
Spinocerebellar ataxia
setr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
126018092 (SPTBN2)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126018092 (SPTBN2)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
126018092 (SPTBN2)
05022 Pathways of neurodegeneration - multiple diseases
126018092 (SPTBN2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
setr04812
]
126018092 (SPTBN2)
Cytoskeleton proteins [BR:
setr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
126018092 (SPTBN2)
Intermediate filaments
Intermediate filament-binding proteins
126018092 (SPTBN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
BILBO1_N
Motif
Other DBs
NCBI-GeneID:
126018092
NCBI-ProteinID:
XP_049636151
LinkDB
All DBs
Position
9:complement(110295158..110538223)
Genome browser
AA seq
2388 aa
AA seq
DB search
MSSTLSPTDFDSLEIQGQYSDINNRWDLPDSDWDNDSSSARLFERSRIKALADEREAVQK
KTFTKWVNSHLARVTCRVGDLYSDLRDGRNLLRLLEVLSGETLPKPTKGRMRIHCLENVD
KALQFLKEQKVHLENMGSHDIVDGNHRLTLGLVWTIILRFQIQDISVETEDNKEKKSAKD
ALLLWCQMKTAGYPNVNVHNFTTSWKDGLAFNAIVHKHRPDLLDFESLKKCNAHYNLQNA
FNVAEKELGLTKLLDPEDVNVDQPDEKSIITYVATYYHYFSKMKALAVEGKRIGKVLDHA
MEAERLVEKYESLASELLQWIEQTIVTLNDRQLANSLSGVQNQLQSFNSYRTVEKPPKFT
EKGNLEVLLFTIQSKLRANNQKVYTPHEGRLISDINKAWERLEKAEHERELALRTELIRQ
EKLEQLAARFDRKAAMRETWLSENQRLVSQDNFGLELAAVEAAVRKHEAIETDIVAYSGR
VQAVDAVAAELAAERYHDIKRIAARQNNVARLWDYLRQMVAARRERLLLNLEVQKVLQDL
LYLMDWMEEMKGRLQSPDLGKHLAGVEDLLQMHELVEADIGVQAERVRAVCASALRFSDP
DKEYKPCDPQLVSERVAALEQSYEALCELAAVRRARLEESRRLWRFLWEAGEAEAWVREQ
QHLLASADTGRDLTGVLRLLNKHAALRGEMSGRLGPLKLTLEQGRQLVAEGHPGASQAAA
RTAELQAQWERLEALAEERAQQLAQAASLYQFQADANDMEAWLVDALRLVSSPELGHEEF
STQTLARQHRALEEEIRGHRPTLDALRDQAAALPAALSRTPEVQGRVPTLEKHYEELQTR
AGERARALEAALAFYTMLSEAGACGLWIDEKEQWLNGLTLPERLEDLEVVQQRFETLEPE
MNALAARVTAVNGIAEQLLQANPPSRDRIVTTQQQLNQRWEHFRSLADGKKAALTSALSI
QNYHLECTETQAWMREKTKVIESTQGLGNDLAGVLALQRKLAGTERDLEAIAARVDELAR
EADALATSHPAQAPAINARLAEVQTGWEDLRATMRRREESLGEARRLQDFLRSLDDFQAW
LGRTQTAVASEETPATLPEAEALLAQHAALRGEVERAQSEYSQLRTVGEEVTRDQADPQC
LFLRQRLEALGTGWEELGRMWESRQGRLAQAHGFQAFLRDARQAEGVLSSQEYFLSHTEM
PGSLQAADAAIKKLEDFASTMEASGERIRGLLEAGRQLVSEGNIHAEKIQEKADSIESRH
RKNQEAMQQLLGRLRDNREQQHFIQDCHELKLWIDEKMLTAQDVSYDEARNLHTKWQKHQ
AFMAELAANKDWLDKVDKEGRELSLEKPELKGLVTEKLGTLHQCWDELESTTQAKARSLF
DANRAELFAQSCSALESWLESLQAQLHSDDYGKDLTSVNILLKKQQMLEREMAVREKEVE
AIQAQAKALAQEDQGAGEVERTSRAVEEKFRALCQPMKERCQHLQASRERHQLHRDVQDE
ILWVTERLPMASSMEHGKDLPSVQLLMKKNQTLQKEIQGHEPRIADLTERQRALGVAATG
PELAELQEMWKRLSHELELRGKRLEQALQAQQFYRDAAEAEAWMGEQELHMMGQEKAKDE
LSAQAEVKKHQVLEQALADYAQTVHQLASSSQDMIDHEHPESTRLSIRQAQVDKLYASLK
ELAGERRERLQEHLRLCQLRRELDDLEQWIQEREVVAASHELGQDYEHVTMLRDKFREFS
RDTSTIGQERVDAANTLANGLISGGHAARATVAEWKDSLNEAWADLLELLDTRGQVLAAA
HELQHFLHGARQALARVQQKQQQLPDGAGRDLNGAEALQRRHCAFEHDIQALSAQVQQVQ
DDGVRLQKAYAGDKADEIGRHMQAVAEAWTQLQGSSAARRQLLLDTTDKFRFFKAVRELM
LWMDGVNLQMDAQERPRDVSSADLVIKNHQGIKAEIEARADRFSSCIDMGQGLLARGHYA
AEEISEKLSQLQARRQETADKWQEKMNWLQLVLEVLVFGRDAGMAEAWLCSQEPLVRSAE
LGCTVDEVESLIKRHEAFQKSAVAWEERFSALEKLTALEEQEKERRRKREEEERRKQPPP
PAPAAAPPAGDLVDGQASDAPGDGSHSRLPTSTLPASVNGVCTDSETPQPQLEQQRLEQG
SFPEGTGTGTGGEASGPQGERPPHTRGTAPPSITQSRSESARMATLPPRGPELSAQEQME
GMLCRKQEMESFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGIPYHGEVPVSLARAQ
GSVALDYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAITTASSASGEPDEPVV
PSATRGMTRAMTMPPVSPVGAEGPVVLRSKDGREREREKRFSFFKKNK
NT seq
7167 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaccctgtcacccactgacttcgacagcttggagatccagggccagtacagt
gacatcaacaatcgctgggatctgcccgactcagactgggacaatgacagcagctccgcc
cgcctcttcgaaaggtctcgaatcaaggctctggcagatgaacgggaggcggtacagaag
aaaaccttcaccaagtgggtgaactcgcacctggctcgagtcacttgccgagtaggggac
ctgtacagtgacctccgggacggacggaacctcctgcggctcctcgaggtgctctccgga
gagacactgcccaagcccaccaagggccgcatgaggatccactgcctggaaaatgtggac
aaggcattgcagttcctaaaagagcagaaggtgcacctggaaaacatgggttcccacgac
atcgtggacgggaaccaccggctcaccctcgggctggtctggaccatcatcctccggttc
cagatccaggacatcagtgtggagacagaggacaacaaggagaagaagtcggcgaaggac
gctctgctgctctggtgccagatgaagacggcagggtaccccaatgtcaacgtgcacaac
tttaccaccagctggaaggatggactggcctttaacgccatcgtccacaagcaccggcca
gacctgctggacttcgagtccctgaagaagtgtaatgctcactacaacctgcagaatgcc
ttcaacgtggctgagaaggagctggggctcaccaagctgctggatcccgaagatgtgaac
gtggaccaaccagatgagaaatccatcattacctacgtggccacttactaccactacttc
tccaaaatgaaagccctggctgtggaaggcaaaagaatcgggaaggtcctggaccatgcc
atggaggcagagcgcctggtggagaagtatgaatccctggcctcggagctgctgcagtgg
attgagcagacgatcgtgaccctcaatgaccggcagctggccaactccctgagtggggtc
cagaaccagctgcagtccttcaactcctaccgcaccgtggagaagccacccaagttcact
gaaaaagggaacctggaagtgcttctcttcaccatccagagcaagctccgagccaacaac
cagaaggtgtacactccccatgagggccggctcatctccgacatcaacaaggcctgggag
cggctggagaaagccgagcacgaacgcgagctggccctgcgcacagagctcattcgccag
gagaagctggagcagctggccgcccgttttgaccgcaaggctgccatgcgggagacctgg
ctcagcgagaaccagcgccttgtatcccaggacaactttgggctggaactggcagccgtg
gaggcggcggtgcgaaagcacgaggctatcgagacggacatcgtggcgtacagcggccgc
gtgcaggcggtggacgcagtggctgccgagttggctgcggagcgctaccacgatatcaag
cgcatcgccgctcgacagaacaatgtggcgcggctctgggactacctgcggcagatggtg
gccgcccgacgagagcggctgctcctcaacctggaggtgcagaaggtgttgcaggatctg
ctctacctcatggactggatggaggagatgaagggccggctgcagtctccagacctgggc
aagcacctggctggggtggaagacttactgcagatgcatgagctggtggaggctgacatc
ggggtgcaggccgagagggtgcgggccgtgtgcgcctcggcgctgcgcttctccgaccca
gacaaagagtacaaaccatgtgacccgcagctggtgtcggagcgggtggccgccctggaa
cagagctacgaggccctgtgcgagctggcggcggtgcggcgggcccggctggaggagtcg
cggcgcttgtggcggttcctgtgggaggcgggcgaggcggaggcctgggtgcgggagcag
cagcatttgctggcctcggctgacacgggccgggacctgaccggcgtcctgcgcctgctc
aacaagcatgcggccctgcgcggcgagatgagcggccgcctggggcccctgaagctgacg
ctggagcagggccggcagctggtggccgagggtcaccccggggccagccaggcggctgcc
cgcaccgccgagctccaggcacagtgggaacggctggaggccctggctgaagagcgcgcc
cagcagctggctcaggctgccagcctctaccagttccaggccgatgccaacgacatggaa
gcatggctggtggatgcgctgcgcctggtgtccagccccgagctgggccatgaggagttt
tccacgcagacgctggcccggcagcaccgggctctggaggaggagatccgtggccaccgg
cccaccctggatgccctgcgagaccaggcggccgccttgcccgctgcactgagccgtacc
cccgaggtgcagggccgtgtccccacgttggagaagcactacgaggagctgcagacccgg
gcaggcgagcgggcgcgggcgctggaggcagccctggccttctacaccatgctcagtgag
gccggggcttgcgggttgtggatagacgagaaggagcagtggctgaacggcctgacactg
cctgagcgcctggaggacctggaggtggtgcagcagagattcgagaccctggagcccgag
atgaatgcactggcagcacgagtcactgcagtgaacggcattgctgagcagctgctgcag
gccaaccccccaagcagggaccgcattgtcaccacccaacagcagctcaaccagaggtgg
gagcacttccggtccctggcagatggcaagaaagcagccctgacctcagccctgagtatc
caaaactaccacctggaatgcaccgagactcaggcctggatgagggagaaaaccaaagtc
atcgagtccacccagggcctgggcaacgacctagccggtgtgttggccctgcagcggaag
ctggcaggcaccgagcgggacctggaggccatcgccgcccgcgtggatgagctggcacgt
gaagctgatgctctggccaccagtcaccccgcccaggcgccagccatcaacgcccggctc
gcagaggtccagacaggctgggaggacctgagggccaccatgcggcgccgggaagagtcg
ctgggggaggcacggcggctgcaagactttctgcgcagcttggatgacttccaggcatgg
ctgggtcgcacacagacggctgtggcctccgaggagaccccggccaccctgcctgaggcc
gaggccctcctggcccagcacgcggccctgcgtggagaggtggagcgggcccagagcgaa
tacagccaactgcgcactgtgggcgaggaggtgacccgggaccaggctgatccccagtgc
ctcttcctgcggcagcggctggaagccctgggtaccggctgggaagagctgggccgcatg
tgggagagtcggcaaggccgcctggcccaggctcacggcttccaggccttcctgcgtgat
gcacgccaggcagagggtgtgctcagcagccaggagtacttcttatcacacacggagatg
cctgggagtctgcaggccgcagatgcagccataaagaagctggaggatttcgcgagcacc
atggaggccagtggggagcgtatccgtgggctgctggaggccgggcgccagctggtgtcg
gagggcaacatccacgctgagaagatccaggagaaggcggactccattgagagcagacac
cgcaagaaccaggaggccatgcagcagctcctgggccgccttcgggacaacagggagcag
caacacttcatccaagattgccacgagctgaagctctggatcgacgagaagatgctgacg
gcgcaagatgtttcctatgacgaggcaagaaacctgcacaccaagtggcagaagcatcag
gccttcatggccgagctggcggccaacaaggactggctggacaaggtggacaaggagggc
cgagagctgagcctagagaagccagagctgaaaggcctggtgactgagaagctaggcacc
ctgcatcagtgctgggacgaactggagagcaccacccaggccaaagcccgcagcctcttc
gatgccaatcgcgctgagctgttcgcccaaagctgttcggccctggagagctggctggag
agcctgcaggcccagctacactcggacgactatggcaaggacctcaccagtgtcaacatt
ctgctcaagaagcagcagatgctggaacgggagatggcagtgcgggaaaaggaggtggag
gccatccaggcgcaggccaaagcgctggcccaggaggaccagggcgccggcgaggtggag
cggacgtctcgggctgtggaggagaagttccgagccctgtgccagcccatgaaggagcgc
tgccagcacctgcaggcctcgcgtgagcggcaccagctccaccgagacgtgcaggatgag
attctgtgggtcacagagcgacttcccatggccagctccatggaacacggcaaggacctc
cccagtgtccagctcctcatgaagaaaaaccagacgctgcaaaaggagattcagggccac
gagccacgcattgcagacctgacagagcgtcagcgagctctgggtgtggcggcgactggc
cccgagctggcagagctacaggagatgtggaaacgcctgagccacgagctggagcttcgg
gggaagcggctggagcaggccctgcaggcccagcagttctaccgtgatgctgctgaggcc
gaggcctggatgggcgagcaggagctgcacatgatgggccaggagaaggccaaggacgag
ctgagtgcccaggcagaagtgaagaagcaccaggtcctggaacaagccctggccgactat
gcccagaccgtccaccagctggcctccagcagccaagacatgattgaccatgagcaccca
gagagcacgaggctgtccatccgccaagcccaggtggacaagctatatgccagcctgaag
gagctggccggggaacgacgggagcggctgcaggagcatctgcggctgtgccagctgcgc
cgggagctggacgacctggaacagtggatccaggaacgtgaggtggtggccgcctcccat
gagctgggccaggactacgagcatgtgacgatgctcagggacaaattccgagagttctcc
cgggacacaagcaccatcgggcaggagcgcgtggacgcggccaacacgctggccaacggg
ctcatctcggggggccatgccgcccgggccacagtggctgagtggaaggacagcctcaac
gaggcttgggctgacctgctcgaactactggacacgaggggccaggtgctggcagccgcg
catgagctacaacacttcctgcacggagcacgccaggccctggcccgtgtccagcagaag
cagcagcagctgccggatggcgccggccgcgaccttaatggtgctgaggccctgcagcgc
cgccactgtgcctttgagcacgacatccaggccctcagtgcccaggttcaacaagtgcag
gacgatggcgtccggctacagaaagcctacgcaggagacaaggcagatgagattggccgc
cacatgcaggccgtggccgaggcctggacccagctgcaggggagctcggccgcccgccgt
cagctgctgctggataccacggacaagttccgcttcttcaaggctgttcgggagctgatg
ctgtggatggatggggtgaacctgcagatggacgctcaggaacggccccgggatgtgtca
tctgcagacctggtcatcaagaaccatcaaggcatcaaggccgagatcgaggccagggct
gaccgcttctcctcctgcattgacatggggcaagggctgctcgccagaggccactatgcg
gctgaggagatctcagagaagctgtcacagctgcaggcccggcgccaggagacggcagac
aagtggcaggagaagatgaactggcttcagctcgtgctggaggtgttggtgttcgggaga
gatgcagggatggctgaggcctggctctgcagccaggagccactggtgcgcagtgccgaa
ctgggctgcacggtggacgaggtggagagtctcatcaagcgacacgaagctttccagaag
tctgcggtggcctgggaggagcgtttcagtgccctggagaagctgactgcgttggaagaa
caggagaaggaacggaggaggaagagggaggaggaggagcggaggaagcagccccctcct
ccagccccggctgccgccccgcctgcaggggacctggtggatggccaggccagcgacgct
cctggggatggaagtcactctcggttgccaacgtccacactacctgccagtgttaatggc
gtctgcacagactcggagaccccacagccccagttggaacagcagagacttgagcagggc
agcttccccgaagggactggcactggcacagggggagaggccagtgggccccagggtgag
cggccaccccacacaaggggcacggcaccccccagcattacccagagcaggtctgagtcg
gcgaggatggccacgctgcccccgagaggccctgagctgtctgcccaggagcagatggag
gggatgttgtgccgaaagcaggagatggagtcgttcggcaagaaggcagccaacaggtcc
tggcagaatgtatactgtgtgctgcggcgtgggagcctgggcttctacaaggacgcgaag
gcggccagcgcagggatcccctaccacggggaagtgcctgtcagtctggccagggcccaa
ggcagcgtggccttagattaccggaagcgcaagcacgtcttcaagctggggctgcaggat
ggaaaagagtatttattccaggccaaagatgaggccgagatgagctcgtggctgagggtg
gtgaacgcggccatcaccacagcgtcctccgcttctggggagcctgacgagcctgtggtg
cccagcgccactcggggcatgacccgcgccatgaccatgccccccgtgtcccctgttggg
gccgaggggccagtggtcctgcgcagcaaagatggcagagaacgagaacgagagaaacgc
ttcagcttcttcaagaagaacaaatag
DBGET
integrated database retrieval system
