Suncus etruscus (white-toothed pygmy shrew): 126018095
Help
Entry
126018095 CDS
T09902
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
126018095 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126018095 (KDM2A)
04121 Ubiquitin system [BR:
setr04121
]
126018095 (KDM2A)
03036 Chromosome and associated proteins [BR:
setr03036
]
126018095 (KDM2A)
Enzymes [BR:
setr01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
126018095 (KDM2A)
Transcription factors [BR:
setr03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
126018095 (KDM2A)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
126018095 (KDM2A)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
126018095 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
126018095 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_4
Cupin_1
Motif
Other DBs
NCBI-GeneID:
126018095
NCBI-ProteinID:
XP_049636156
LinkDB
All DBs
Position
9:110657049..110777359
Genome browser
AA seq
1162 aa
AA seq
DB search
MEPEEERIRYSQRLRGTMRRRYEDDGISDDEIEGKRTFDLEEKLHTNKYNANFVTFMEGK
DFNVEYIQRGGLRDPLIFKSSDGLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNTQKGIE
MTMAQWTRYYETPEEEREKLYNVISLEFSHTRLENMVQRPTTVDFIDWVDNMWPRHLKES
QTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHN
LELYENWLLSGKQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFL
HSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITNRSHLTKEFQKESLN
MDLELNGLDSGNGDEEALDREPRRLSGRRSVLTSPIANGVNLDYDGVGKTCRSLPPLKKN
VSGDSSSDSSRGSHNGQVWDPQCSPRKDRQVHLTHFELEGLRCLVDKLESLPLHKKCVPT
GIEDEDALIADVKILLEDLANSDPKLALTGVPIVQWPKRDKLKFPTRPKVRVPTIPITKP
HTMKPAPRLTPVRPAAASPIVSGARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRM
KQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEG
LLNEELPNCWECPKCYQEDSSEKSQKRKMEESDEESVQAKVLRPLRSCDEPLTPPPHSPS
SMLQLIHDPVSPRAVVTRSSPGAGPSDHHSVSRDERFKRRQLLRLQATERTMVREKENNP
SGKKELSEVEKAKIRGSYLTVTLQRPTKELHGTSIVPKLQAITASSANLRHSPRVLVQHC
PARIPQRGDEEGLGGDEEDEEEEEEDDDSAEEGGAARLNGRGSWAQDGDESWMQREVWMS
VFRYLSRKELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGIIKRQPVSLDLS
WTNISKKQLTWLVNRLPGLKDLLLAGCSWSAVSALSTSSCPLLRTLDLRWAVGIKDPQIR
DLLTPPTDKPGQDNRSKLRNMTDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTDQ
SSNLLTAVGSSTRYSLTELNMAGCNKLTDQTLIYLRRIANVTLIDLRGCKQITRKACEHF
ISDLSINSLYCLSDEKLIQKIS
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggaacctgaagaagaaagaattcgttacagccagagattgcgtggtaccatgaggcgg
cgctatgaagatgatggtatttctgatgatgaaatcgaagggaaaaggacatttgacttg
gaagagaaactccacaccaacaaatataatgcaaattttgttacttttatggagggaaaa
gattttaacgtagaatatatccagcgaggtggcttaagagatcctctgatcttcaagagt
tctgatggacttggaataaagatgccagatccagacttcactgtgaatgatgtcaaaatg
tgtgtggggagtcgccgcatggtggatgtcatggatgtgaacacacagaaaggcattgaa
atgaccatggctcagtggacacgctactatgagactccagaggaggagcgagagaagctc
tataatgtcatcagcctagagtttagtcacaccagactggagaacatggtgcagagaccc
actacggtggattttatcgattgggtagacaacatgtggccgaggcatttgaaagagagt
cagacggagtcaaccaatgccatcctagagatgcagtacccaaaagtgcagaagtactgt
ctaatgagtgttcgaggctgctatacggacttccatgtggacttcggtggtacctctgtt
tggtatcacatccaccaagggggaaaggtcttctggctcatcccccctacagcccacaac
ctggagctgtacgagaattggctgctgtcagggaaacagggagacatctttctgggtgac
cgggtgtcagattgccaacgcattgagctcaagcagggctataccttcgtcattccctca
ggctggattcatgctgtgtacactcctacagacacgttagtgttcggaggcaattttttg
catagtttcaatatccccatgcagttaaaaatatacaacattgaagatcggacacgggtc
ccgaataagtttcgttatccattctactatgaaatgtgttggtacgtgttagagcgctat
gtatactgcataaccaaccgctcccacttaactaaggaattccagaaagagtccctgaac
atggacttggagttgaatggcttggactctggaaacggggacgaggaagccttggaccga
gagccacggcgcttgagtggcagacgatctgtcctcacgagccccatagccaatggtgtc
aacttggattatgacggagtgggcaaaacgtgccgaagtcttcctcctctgaagaaaaac
gtgtccggagactcgtcctctgactccagccgaggttcccacaatggccaagtgtgggat
ccacagtgtagcccccgaaaggacaggcaggtgcacctgacccattttgagcttgaaggc
cttcgctgccttgtagataagttggagtctctaccactgcacaagaaatgtgtccccaca
ggaatagaagacgaagatgctctcatcgctgatgtaaagattttgctggaagaccttgct
aacagcgatcccaagttagctctcactggagtcccgatagtacagtggccaaaaagggat
aagcttaagttccccacccggccaaaggtgcgggttcctaccattcccatcaccaagcct
cacactatgaaaccagctccgcggttaacacctgtgagaccagccgctgcctcccccatc
gtgtcgggagcccggcggagaagagtgcggtgtcggaaatgcaaggcctgcgtgcaagga
gagtgtggagtttgtcactactgcagggacatgaagaagtttggggggcctggtcgcatg
aagcagtcctgtgttctccggcagtgcttggcgcccagactgcctcactcggtcacttgt
tccctctgtggagaggtggatcagaacgaggagacccaggactttgagaagaagctcatg
gagtgctgtatctgcaatgaaattgttcatcccggctgccttcagatggatggagagggg
ctgctcaatgaggaattgccaaactgctgggagtgtccaaagtgctaccaggaggacagc
tcagagaaaagccagaagcggaaaatggaagagagcgatgaagaatccgtgcaagccaaa
gtcctgcggcccctgcggagctgtgacgaacccctcacacccccgccgcactcccccagc
tccatgctgcagctcattcacgaccccgtttccccccgggctgtggtgacgaggtcatcc
cctggggctggccccagcgaccaccacagtgtcagccgcgacgagcgcttcaaacggcgg
cagttgctgcggctgcaggccactgagcgcactatggtacgggaaaaggagaacaacccc
agtggcaaaaaggagctgtctgaagtggagaaagccaagatccggggatcgtacctcacc
gtcacgctccaaaggcccaccaaagagctccatgggacgtccatcgtgcccaagctgcag
gccatcacagcctcctctgccaacctgcgccattccccccgtgtactagtacagcactgc
ccagcccggatcccccagcgcggggacgaggaggggcttgggggagatgaggaggacgag
gaggaggaagaggaggacgatgacagtgcagaggaggggggtgcagccaggctgaatggc
cggggcagttgggctcaggatggagatgaaagctggatgcagcgggaggtctggatgtct
gtcttccgctacctcagccgcaaagaactttgtgaatgtatgcgagtgtgcaagacgtgg
tataaatggtgctgcgacaaaagactttggacaaaaattgacttgagtaggtgtaaagct
atcgtgccccaggctctcagtggaatcatcaaacgacagccagtcagcctcgacctcagt
tggaccaacatctccaaaaagcaattgacgtggctggtcaataggctgccgggactcaaa
gacctcctcctcgcaggctgctcgtggtcagcagtctctgcccttagcacctccagctgc
ccccttctcaggacccttgatcttcggtgggcagtaggaatcaaggaccctcaaattcgg
gacttgctgaccccaccaactgataaaccgggtcaggacaatcgcagtaagctccggaac
atgactgacttccggctggcaggccttgatatcacagacgccacgcttcgcctcatcatc
cgccacatgccccttctgtctcggctcgacctcagtcattgcagccaccttacagatcag
tcctccaatctgctcacggctgtcgggtcttccacacgttactccctcacagagctcaac
atggccggttgcaataagttgacagaccagaccctcatctacctacggcgcatcgccaac
gtcaccttgatcgaccttcgaggatgcaaacagatcactcggaaagcctgtgagcacttc
atctcagacttgtccatcaacagtctctactgcctgtctgacgagaagctgatccagaag
atcagctaa
DBGET
integrated database retrieval system
