Suncus etruscus (white-toothed pygmy shrew): 126018147
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Entry
126018147 CDS
T09902
Symbol
SMPD1
Name
(RefSeq) sphingomyelin phosphodiesterase
KO
K12350
sphingomyelin phosphodiesterase [EC:
3.1.4.12
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr00600
Sphingolipid metabolism
setr01100
Metabolic pathways
setr04071
Sphingolipid signaling pathway
setr04142
Lysosome
setr04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
126018147 (SMPD1)
09130 Environmental Information Processing
09132 Signal transduction
04071 Sphingolipid signaling pathway
126018147 (SMPD1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
126018147 (SMPD1)
09143 Cell growth and death
04217 Necroptosis
126018147 (SMPD1)
Enzymes [BR:
setr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
126018147 (SMPD1)
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Motif
Pfam:
Metallophos
ASMase_C
Motif
Other DBs
NCBI-GeneID:
126018147
NCBI-ProteinID:
XP_049636238
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Position
9:55538862..55544273
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AA seq
625 aa
AA seq
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MSCHGESRAPGRSGSCEERGPDRSCELPSTLLLWMSLVLAVALAPSVLPWSWVAAHPVLV
QEHPVAFHPLVPQLRQVFGRWNLSCPACKGLFTALDFGLKKDAGVAWVGSMAIKMCTLMK
IAPPAVCQSAVHLFQDDIVDVWTRSVLSPSEACGLLLGSTCGEWDIFSSWNISLPKVPKP
APKPPNPPVPGAPISRVLFLTDLHWDQDYLEGADPNCENPLCCRRDSGPPPASRPGAGHW
GEYSKCDLPLWTLESLLSGLGPAGPFDMVYWTGDIPAHNIWHQSRQDQLRALTTVTALVK
KFLGPVPVYPAVGNHESTPVNSFPPPFIEGNQSSRWLYEAMAEAWESWLPAEALRTLRIG
GFYAFSPRPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWLVGELQAAEDQGDKVHIIG
HIPPGHCLKSWSWNYYRIIARYENTVAGQFFGHTHVDEFELFYDEETLSRPLSVAFLAPS
ATTYISLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTEANKPGATPHWQLLYRARETYG
LPNALPAAWHDLVYRMRGDPKLFQTFWFLYHKGHPPSEPCGTPCRLATLCAQLSARSDSP
ALCRHLAPNESLSSAWSLQPQPSMC
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgccacggagagtctcgcgccccgggccgctccgggtcctgcgaggagcgaggt
cccgacagatcctgcgagctccccagcactctgctcctgtggatgagcttggtcctagcc
gtggccttggccccctctgtgttgccctggagctgggtcgcggcccatcctgttctcgtc
caagaacatcccgtcgccttccatcccttggtgccgcagctccggcaagtcttcggaagg
tggaacctcagctgcccggcctgcaaagggctcttcactgccctcgacttcgggctgaag
aaggatgctggtgtggcctgggtaggctctatggccatcaagatgtgcacactgatgaag
attgcaccacctgctgtgtgccagtcggccgtccatctcttccaggatgacatagtagac
gtgtggacccgctctgtgctcagcccatctgaggcctgtggcctgctcctgggctccacc
tgtggggagtgggacatattctcctcgtggaacatctctttgcccaaagtaccaaagcca
gcccctaagccacccaaccctccagtcccaggggcccccatcagccgtgtcctcttcctc
actgatctgcactgggatcaagactacctcgagggtgcagatcccaactgtgagaacccg
ctgtgctgccgcagagattctggcccaccacctgcctctcgtccaggtgctggacactgg
ggcgagtacagcaagtgtgacctgcccctgtggactctggagagcctgttgagtgggctt
ggccccgctggtccttttgacatggtgtattggactggagacatccctgcccacaatatc
tggcaccagtctcggcaggaccagctgcgggctctgaccacagtcacagccctggtgaag
aagttcttgggaccagtgcctgtataccctgccgtgggcaaccatgagagcacacctgtc
aatagcttccctccacccttcatagagggcaatcagtcctcccgatggctctatgaggcc
atggcggaggcctgggagtcctggctgccggctgaggcccttcgtaccctcagaatcggg
gggttctatgccttttccccacgtcctggcctacgcctcatctctctcaatatgaatttt
tgttcccgtgagaacttctggctcttgatcaactctacagatcctgctggacagctccaa
tggctggtgggggaacttcaagcagctgaggatcaaggagacaaagtacatataattggc
catattcccccagggcactgcctgaagagctggagctggaactactaccgaattattgcc
aggtatgagaacaccgtggctggtcagttctttggccacacacatgtggatgagtttgag
ctcttctatgatgaggaaactctaagcaggccattatctgtggccttcctggcacccagt
gccaccacctacatcagccttaatcctggttaccgggtctaccaaatagacggcaactac
tcagggagttcccatgtggtcctggaccatgagacctacatcctgaatttgacggaggcc
aacaagcccggtgctacaccacactggcagcttctctaccgggctcgagaaacctatggg
ctgcccaatgctctgcctgctgcctggcatgacctggtataccgcatgcggggcgatcca
aagctcttccagaccttctggtttctctaccacaagggccacccgccctcggagccctgt
ggcacgccctgccgcctcgctacactgtgtgcccaactttctgcccgctcagacagtcca
gctctgtgtcgccacctggcgccgaacgagagcctctccagtgcctggagcctgcagcct
cagccctcaatgtgctag
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