Suncus etruscus (white-toothed pygmy shrew): 126018394
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Entry
126018394 CDS
T09902
Symbol
CD40
Name
(RefSeq) tumor necrosis factor receptor superfamily member 5
KO
K03160
tumor necrosis factor receptor superfamily member 5
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04060
Cytokine-cytokine receptor interaction
setr04064
NF-kappa B signaling pathway
setr04514
Cell adhesion molecules
setr04620
Toll-like receptor signaling pathway
setr04672
Intestinal immune network for IgA production
setr05144
Malaria
setr05145
Toxoplasmosis
setr05166
Human T-cell leukemia virus 1 infection
setr05169
Epstein-Barr virus infection
setr05202
Transcriptional misregulation in cancer
setr05310
Asthma
setr05320
Autoimmune thyroid disease
setr05322
Systemic lupus erythematosus
setr05330
Allograft rejection
setr05340
Primary immunodeficiency
setr05416
Viral myocarditis
setr05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
126018394 (CD40)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
126018394 (CD40)
04514 Cell adhesion molecules
126018394 (CD40)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
126018394 (CD40)
04672 Intestinal immune network for IgA production
126018394 (CD40)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
126018394 (CD40)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
126018394 (CD40)
05169 Epstein-Barr virus infection
126018394 (CD40)
09174 Infectious disease: parasitic
05144 Malaria
126018394 (CD40)
05145 Toxoplasmosis
126018394 (CD40)
09163 Immune disease
05310 Asthma
126018394 (CD40)
05322 Systemic lupus erythematosus
126018394 (CD40)
05320 Autoimmune thyroid disease
126018394 (CD40)
05330 Allograft rejection
126018394 (CD40)
05340 Primary immunodeficiency
126018394 (CD40)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
126018394 (CD40)
05416 Viral myocarditis
126018394 (CD40)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
setr04050
]
126018394 (CD40)
04090 CD molecules [BR:
setr04090
]
126018394 (CD40)
Cytokine receptors [BR:
setr04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
126018394 (CD40)
CD molecules [BR:
setr04090
]
Proteins
126018394 (CD40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
RANK_CRD_2
Motif
Other DBs
NCBI-GeneID:
126018394
NCBI-ProteinID:
XP_049636500
LinkDB
All DBs
Position
9:27325298..27336603
Genome browser
AA seq
280 aa
AA seq
DB search
MVRLLLQGLFWGCFLTTVHPESLTACKENQYSINSQCCDLCQPGKKLVKDCSEAASTECT
SCGRDEFLDTWNREPRCHQHQYCDHNLGLRILEEGTAETDTTCTCIEGQHCANKACESCI
PHSLCAPGFGVKQMATGVLDTICEGCPVGFFSNVSSALDKCRPWTSCETQGLVEIRAGTN
VTDVRCGVQNRTRILVVIPIVLAVLCTVISVLACIWKLRIKKPEEDTELQSFELTQCQAG
SGQKPVESEDISPVQETLLGCQPVSQEDGKESRVSVQERL
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggttcgactgcttttgcagggtctcttctggggctgctttttgaccactgtccaccca
gaatcacttactgcatgcaaagaaaaccagtactcaataaacagtcagtgctgtgatttg
tgccagccaggaaagaaactggtgaaggactgctcggaggccgccagcactgaatgtact
tcttgtggtcgagatgaatttctggacacctggaacagagagccacgctgccaccagcat
caatactgtgaccataacctagggctccggatcctggaggaggggacggcagaaacagac
acgacttgcacgtgtattgagggccagcactgtgccaacaaggcctgtgaaagctgtatc
ccacatagcctgtgtgccccaggttttggagtcaagcagatggctactggggttttggac
accatctgcgaaggctgccccgttggcttcttctccaatgtgtcatctgctcttgacaaa
tgccgtccttggacaagctgcgagacccaaggcctggtggagattcgagcagggacaaat
gtgacagatgtccgctgtggtgttcagaatcggacaagaatcctggtggtaattcctatc
gtgttggctgttctgtgcactgttatatcagtacttgcctgtatctggaagttgagaatc
aagaagccagaggaggacaccgagcttcagagttttgaactcacccagtgtcaggctggg
agtggtcagaagcctgtggagtcagaggacatttctccagtgcaggagacgctacttggg
tgccaacctgtgtctcaggaggacggcaaggagagccgcgtttccgtccaagagagactg
tga
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