KEGG   Suncus etruscus (white-toothed pygmy shrew): 126021976
Entry
126021976         CDS       T09902                                 
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1
  KO
K02084  apoptotic protease-activating factor
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr01524  Platinum drug resistance
setr04115  p53 signaling pathway
setr04210  Apoptosis
setr04215  Apoptosis - multiple species
setr05010  Alzheimer disease
setr05012  Parkinson disease
setr05014  Amyotrophic lateral sclerosis
setr05016  Huntington disease
setr05020  Prion disease
setr05022  Pathways of neurodegeneration - multiple diseases
setr05134  Legionellosis
setr05152  Tuberculosis
setr05160  Hepatitis C
setr05161  Hepatitis B
setr05162  Measles
setr05164  Influenza A
setr05168  Herpes simplex virus 1 infection
setr05169  Epstein-Barr virus infection
setr05200  Pathways in cancer
setr05222  Small cell lung cancer
setr05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:setr00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    126021976 (APAF1)
   04215 Apoptosis - multiple species
    126021976 (APAF1)
   04115 p53 signaling pathway
    126021976 (APAF1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    126021976 (APAF1)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    126021976 (APAF1)
  09172 Infectious disease: viral
   05161 Hepatitis B
    126021976 (APAF1)
   05160 Hepatitis C
    126021976 (APAF1)
   05164 Influenza A
    126021976 (APAF1)
   05162 Measles
    126021976 (APAF1)
   05168 Herpes simplex virus 1 infection
    126021976 (APAF1)
   05169 Epstein-Barr virus infection
    126021976 (APAF1)
  09171 Infectious disease: bacterial
   05134 Legionellosis
    126021976 (APAF1)
   05152 Tuberculosis
    126021976 (APAF1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    126021976 (APAF1)
   05012 Parkinson disease
    126021976 (APAF1)
   05014 Amyotrophic lateral sclerosis
    126021976 (APAF1)
   05016 Huntington disease
    126021976 (APAF1)
   05020 Prion disease
    126021976 (APAF1)
   05022 Pathways of neurodegeneration - multiple diseases
    126021976 (APAF1)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    126021976 (APAF1)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    126021976 (APAF1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 NB-ARC WD40_WDHD1_1st APAF1_C WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd APAF-1-like_WHD Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_EML WDR90_beta-prop_4th CARD Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_NWD2_C Beta-prop_Vps41 WD40_RFWD3 Beta-prop_WDR35_TULP_N eIF2A Beta-prop_NUP159_NUP214 Beta-prop_DCAF4 CARD_2 WD40_like Beta-prop_WDR11_2nd Beta-prop_SPT8 Beta-prop_DCAF12 AAA_16 WDR54 AAA_22 Utp8_b_propeller NPHP3_N AAA_18 ATPase_2 B-prop_COPA_B_2nd
Other DBs
NCBI-GeneID: 126021976
NCBI-ProteinID: XP_049638822
LinkDB
Position
11:53856671..53986220
AA seq 1249 aa
MDAKARNCLLQHKEALEKDIKTSYIMDHMISDGVLTVSEEEKVKNEPTQQHRAAMLIKMI
LKKDNYSYISFYNALLHEGYKDLAALLHDAVPAVSSFNGKDSLDGITSYVRTVLCEGGVP
QRPVVFVTRKKLIIAIQQKLFKLNGEPGWVTIYGMAGCGKSVLAAEAVRDHSLLENFFPG
GVHWVSIGKQDKSGLLMKLQNLCTRLDQDESFSQRLPLNIEEAKDRLRILMLRKYPRSLL
ILDDVWDSWVLKAFDNQCQILLTTRDKSVTDSVMGPKYVVPVEGGLGKEKGLEILSLFVN
MKKTELPEEAHSIIKECKGSPLVVSLIGALLRDFPNRWGYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCILWDMETEEAEDVLQEFVN
KSLLFCDRNGKSFHYYLHDLQVDFLTEKNRSQLQDLHKKIITQFQRYHQLSTLSPDQEDC
MYWYNFLAYHMASAKMHKELCTLMFSLDWIKAKTEFVGPAHLIHEFVTYRHILDEKDCAV
CENFQEFLSLNGHLLGRQPFPNVIQLGLCEPETSEVYQQAKLQAKQEVDNGMLYLEWINK
KTVKNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEV
LCCAFSTCNRFIATGSVDKKVKIWNSVTGELIQTYDEHSEQVNCCHFTYSSHHLLLATGS
SDCFLKLWDLNLKECRNTLFGHTNTVNHCRFSPDDKLLASCSADGTLKLWDVKSANESKS
INVKQFFLNSEEPQEDIEVIVKCCSWFADGAKIMVAAKNKIFLFDIHTSSLLAEVHTGHN
STIQYCDFSPHNHLAVVTLSQYCVELWNMESCLKVADCRGHLSWVHCVMFSPDGLSFLTS
SDDQTIRLWETKKVCENSAKVLKQEIDVLFQENEVMILAVDNIRRLQLISGKTGQIDDLT
EAQVTCCCVSPHLQYIAFGDEDGTIKVLELLNSKIFQSRMGHKNIVRHIQFTADGKTVIS
SSDASVIQVWNWQSEEYVFLQAHQETVKDFRLLKDSRLLSWSFDGTVKVWNIITGKIEKD
FVCHQDTVLSCDISVDAAKFSSTSTDKTAKIWSFEQFSPLHELMGHKGCVRCSVFSMDTT
LLATGDDNGEIRIWNVSNGELLHLCAPVSIEGGTATHGGWVTDLCFSPDSRILVSAGGYL
KWWNVITGESLQTFYTNGTNLKKIHVSPDFKTYVTVDNLGILYILQILE
NT seq 3750 nt   +upstreamnt  +downstreamnt
atggatgcaaaagctcgaaattgtttgcttcaacataaagaagccctggaaaaggacatc
aaaacatcctacatcatggatcacatgattagcgatggtgttttaactgtctcagaggaa
gagaaagtaaaaaatgagcccactcaacagcatcgagcagctatgctaattaaaatgata
cttaaaaaagataattattcttacatatcattttataatgctttactacatgaaggctat
aaagatcttgctgcacttctccatgatgctgttcctgctgtctcttctttcaacggcaaa
gattcacttgatggaataacttcatatgtcagaacagtcttgtgtgaaggtggagtccca
cagaggccagtcgtttttgtgaccaggaagaagctgatcattgcaattcagcagaagctc
ttcaaactgaatggtgaaccgggatgggttaccatatacggaatggcaggttgtgggaag
tctgtattagctgcagaagctgttcgagatcattccctcttagaaaatttcttcccaggg
ggtgtacattgggtttccattgggaaacaggacaaatctggacttttgatgaaactgcag
aatctttgcacacggttagatcaggatgaaagcttttcccagagactcccccttaatatt
gaagaggctaaagatcgtctccgcattctgatgctgcgcaaatatccaaggtctctgttg
atcttggatgatgtttgggattcttgggtgttaaaagcttttgacaatcaatgtcagatt
cttctaacaaccagagacaagagtgtcacagattctgtaatgggacctaaatatgtagtt
cctgtggagggtggcttaggaaaagaaaaaggacttgagattttatctctttttgttaat
atgaagaaaacagaattgccagaagaagctcatagtattataaaagaatgtaaaggttct
ccccttgtagtatctttaattggtgctcttttacgtgactttcctaatcgctggggatac
tacctcagacaacttcagaataagcaatttaagagaataaggaaatcttcatcttatgat
tatgaagccttggatgaagccatgtctataagtgttgagatgcttagagaagacatcaaa
gattattacaccgatctttctattcttcaaaaggatgttaaggtacctacaaaggtatta
tgtattctctgggatatggaaactgaggaagctgaagatgttctgcaggagtttgttaat
aagtcgctcttattctgtgatcggaatggaaagtcctttcattactatttacatgatctt
caagtagatttccttacagagaagaatcgcagtcagcttcaggatctacataaaaagata
atcactcagttccagagatatcatcagctaagcactctttcaccagatcaggaggactgc
atgtattggtataattttttggcttatcacatggccagtgccaaaatgcacaaagaactt
tgtactttaatgttttccctggattggataaaagcaaaaacagaatttgtaggtcctgct
catctgattcatgaatttgtgacatacaggcatatattggatgaaaaggattgtgccgtc
tgtgagaatttccaggagtttttatctttaaatggacaccttcttgggcgacagccattt
cctaatgttatacagctgggtctctgtgaaccagaaacttcagaagtttatcagcaagcg
aagctgcaggccaagcaggaggttgataatggaatgctctacctggagtggataaacaaa
aagaccgtcaagaatctctctcgcttagttgtccgcccccatacagatgctgtttaccat
gcttgcttttctgaggatggtcaaagaatagcttcttgtggagctgataaaaccttacag
gtgttcaaagctgaaacaggagagaaactcttagaaatcaaggctcatgaggatgaagta
ctatgctgtgcattctccacatgtaatagatttatagcgactggctctgtggataaaaaa
gtgaagatttggaattctgtgactggagaattaatacaaacctatgatgagcactcagaa
caagttaattgctgtcactttacctatagtagtcatcaccttctcttagccactggatca
agtgactgcttcctcaaactctgggatttgaatctaaaagaatgtcgaaataccttgttt
ggccatacaaatacagttaatcactgcagattttcgccagatgataagcttttggctagt
tgttcagctgatggaacattaaagctgtgggacgtgaaatcagcaaatgaaagcaaaagc
atcaatgtgaagcagttcttcctaaattcagaggagcctcaagaagacattgaagtaata
gtgaaatgttgttcatggtttgctgatggtgccaagataatggtagcagcaaaaaataag
atctttctttttgacattcatactagcagcttgttggcagaagtccacacaggccataac
agtaccattcagtattgtgacttctcccctcataatcatttagcagtggtgactctatcc
cagtactgtgtggagttgtggaatatggagtcctgcctaaaagtagctgattgcagagga
catttaagctgggttcattgtgtgatgttttctcctgatggactatcctttttgacatct
tctgatgaccagacaatcaggctttgggagacaaaaaaagtatgtgagaactcagctaaa
gtgttaaagcaagaaatagatgttttgtttcaagaaaatgaagtgatgattcttgcagtt
gacaatatacgacgtctgcaactcattagtggaaaaacaggtcaaattgatgatctcact
gaagctcaagttacctgctgttgcgtgagtccacatcttcagtatattgcatttggagat
gaagatggaaccattaaggttttggaactcctgaacagcaaaattttccaatccagaatg
ggacacaagaacattgtacgacatatccagttcacagctgatgggaagactgttatttca
agctctgatgcttctgtaattcaggtctggaattggcagtcagaggagtatgtttttctg
caagcacatcaggaaacagtaaaagattttaggctcttgaaagattcaagactcctttct
tggtcatttgatggaacagtgaaggtatggaatattattactggaaaaatagaaaaagac
tttgtttgtcatcaggatacagtactttcttgtgatatatctgtggatgctgccaagttt
tcatctacttctactgacaagactgcaaagatctggagttttgaacagttttcgcctctt
catgaattgatgggccacaagggctgtgtgcgatgctctgtcttctccatggacacgacc
ctgctggcgactggggatgacaacggagagatccggatatggaatgtctccaacggtgag
ttgcttcatttgtgtgctccagtttcaatagaaggaggaacagctactcatggaggctgg
gtgactgacctttgtttctctccagatagcagaattcttgtttctgctggaggatatctt
aagtggtggaatgttatcactggggaatccttacagaccttctacacaaatggaaccaat
ctgaagaaaattcatgtgtcccctgacttcaaaacatatgtgactgtggacaatcttgga
attttatatattttacagattttggagtaa

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