Suncus etruscus (white-toothed pygmy shrew): 126021976
Help
Entry
126021976 CDS
T09902
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr01524
Platinum drug resistance
setr04115
p53 signaling pathway
setr04210
Apoptosis
setr04215
Apoptosis - multiple species
setr05010
Alzheimer disease
setr05012
Parkinson disease
setr05014
Amyotrophic lateral sclerosis
setr05016
Huntington disease
setr05020
Prion disease
setr05022
Pathways of neurodegeneration - multiple diseases
setr05134
Legionellosis
setr05152
Tuberculosis
setr05160
Hepatitis C
setr05161
Hepatitis B
setr05162
Measles
setr05164
Influenza A
setr05168
Herpes simplex virus 1 infection
setr05169
Epstein-Barr virus infection
setr05200
Pathways in cancer
setr05222
Small cell lung cancer
setr05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
126021976 (APAF1)
04215 Apoptosis - multiple species
126021976 (APAF1)
04115 p53 signaling pathway
126021976 (APAF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
126021976 (APAF1)
09162 Cancer: specific types
05222 Small cell lung cancer
126021976 (APAF1)
09172 Infectious disease: viral
05161 Hepatitis B
126021976 (APAF1)
05160 Hepatitis C
126021976 (APAF1)
05164 Influenza A
126021976 (APAF1)
05162 Measles
126021976 (APAF1)
05168 Herpes simplex virus 1 infection
126021976 (APAF1)
05169 Epstein-Barr virus infection
126021976 (APAF1)
09171 Infectious disease: bacterial
05134 Legionellosis
126021976 (APAF1)
05152 Tuberculosis
126021976 (APAF1)
09164 Neurodegenerative disease
05010 Alzheimer disease
126021976 (APAF1)
05012 Parkinson disease
126021976 (APAF1)
05014 Amyotrophic lateral sclerosis
126021976 (APAF1)
05016 Huntington disease
126021976 (APAF1)
05020 Prion disease
126021976 (APAF1)
05022 Pathways of neurodegeneration - multiple diseases
126021976 (APAF1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
126021976 (APAF1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
126021976 (APAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
NB-ARC
WD40_WDHD1_1st
APAF1_C
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
APAF-1-like_WHD
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_EML
WDR90_beta-prop_4th
CARD
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
CARD_2
WD40_like
Beta-prop_WDR11_2nd
Beta-prop_SPT8
Beta-prop_DCAF12
AAA_16
WDR54
AAA_22
Utp8_b_propeller
NPHP3_N
AAA_18
ATPase_2
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
126021976
NCBI-ProteinID:
XP_049638822
LinkDB
All DBs
Position
11:53856671..53986220
Genome browser
AA seq
1249 aa
AA seq
DB search
MDAKARNCLLQHKEALEKDIKTSYIMDHMISDGVLTVSEEEKVKNEPTQQHRAAMLIKMI
LKKDNYSYISFYNALLHEGYKDLAALLHDAVPAVSSFNGKDSLDGITSYVRTVLCEGGVP
QRPVVFVTRKKLIIAIQQKLFKLNGEPGWVTIYGMAGCGKSVLAAEAVRDHSLLENFFPG
GVHWVSIGKQDKSGLLMKLQNLCTRLDQDESFSQRLPLNIEEAKDRLRILMLRKYPRSLL
ILDDVWDSWVLKAFDNQCQILLTTRDKSVTDSVMGPKYVVPVEGGLGKEKGLEILSLFVN
MKKTELPEEAHSIIKECKGSPLVVSLIGALLRDFPNRWGYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCILWDMETEEAEDVLQEFVN
KSLLFCDRNGKSFHYYLHDLQVDFLTEKNRSQLQDLHKKIITQFQRYHQLSTLSPDQEDC
MYWYNFLAYHMASAKMHKELCTLMFSLDWIKAKTEFVGPAHLIHEFVTYRHILDEKDCAV
CENFQEFLSLNGHLLGRQPFPNVIQLGLCEPETSEVYQQAKLQAKQEVDNGMLYLEWINK
KTVKNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEV
LCCAFSTCNRFIATGSVDKKVKIWNSVTGELIQTYDEHSEQVNCCHFTYSSHHLLLATGS
SDCFLKLWDLNLKECRNTLFGHTNTVNHCRFSPDDKLLASCSADGTLKLWDVKSANESKS
INVKQFFLNSEEPQEDIEVIVKCCSWFADGAKIMVAAKNKIFLFDIHTSSLLAEVHTGHN
STIQYCDFSPHNHLAVVTLSQYCVELWNMESCLKVADCRGHLSWVHCVMFSPDGLSFLTS
SDDQTIRLWETKKVCENSAKVLKQEIDVLFQENEVMILAVDNIRRLQLISGKTGQIDDLT
EAQVTCCCVSPHLQYIAFGDEDGTIKVLELLNSKIFQSRMGHKNIVRHIQFTADGKTVIS
SSDASVIQVWNWQSEEYVFLQAHQETVKDFRLLKDSRLLSWSFDGTVKVWNIITGKIEKD
FVCHQDTVLSCDISVDAAKFSSTSTDKTAKIWSFEQFSPLHELMGHKGCVRCSVFSMDTT
LLATGDDNGEIRIWNVSNGELLHLCAPVSIEGGTATHGGWVTDLCFSPDSRILVSAGGYL
KWWNVITGESLQTFYTNGTNLKKIHVSPDFKTYVTVDNLGILYILQILE
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaaagctcgaaattgtttgcttcaacataaagaagccctggaaaaggacatc
aaaacatcctacatcatggatcacatgattagcgatggtgttttaactgtctcagaggaa
gagaaagtaaaaaatgagcccactcaacagcatcgagcagctatgctaattaaaatgata
cttaaaaaagataattattcttacatatcattttataatgctttactacatgaaggctat
aaagatcttgctgcacttctccatgatgctgttcctgctgtctcttctttcaacggcaaa
gattcacttgatggaataacttcatatgtcagaacagtcttgtgtgaaggtggagtccca
cagaggccagtcgtttttgtgaccaggaagaagctgatcattgcaattcagcagaagctc
ttcaaactgaatggtgaaccgggatgggttaccatatacggaatggcaggttgtgggaag
tctgtattagctgcagaagctgttcgagatcattccctcttagaaaatttcttcccaggg
ggtgtacattgggtttccattgggaaacaggacaaatctggacttttgatgaaactgcag
aatctttgcacacggttagatcaggatgaaagcttttcccagagactcccccttaatatt
gaagaggctaaagatcgtctccgcattctgatgctgcgcaaatatccaaggtctctgttg
atcttggatgatgtttgggattcttgggtgttaaaagcttttgacaatcaatgtcagatt
cttctaacaaccagagacaagagtgtcacagattctgtaatgggacctaaatatgtagtt
cctgtggagggtggcttaggaaaagaaaaaggacttgagattttatctctttttgttaat
atgaagaaaacagaattgccagaagaagctcatagtattataaaagaatgtaaaggttct
ccccttgtagtatctttaattggtgctcttttacgtgactttcctaatcgctggggatac
tacctcagacaacttcagaataagcaatttaagagaataaggaaatcttcatcttatgat
tatgaagccttggatgaagccatgtctataagtgttgagatgcttagagaagacatcaaa
gattattacaccgatctttctattcttcaaaaggatgttaaggtacctacaaaggtatta
tgtattctctgggatatggaaactgaggaagctgaagatgttctgcaggagtttgttaat
aagtcgctcttattctgtgatcggaatggaaagtcctttcattactatttacatgatctt
caagtagatttccttacagagaagaatcgcagtcagcttcaggatctacataaaaagata
atcactcagttccagagatatcatcagctaagcactctttcaccagatcaggaggactgc
atgtattggtataattttttggcttatcacatggccagtgccaaaatgcacaaagaactt
tgtactttaatgttttccctggattggataaaagcaaaaacagaatttgtaggtcctgct
catctgattcatgaatttgtgacatacaggcatatattggatgaaaaggattgtgccgtc
tgtgagaatttccaggagtttttatctttaaatggacaccttcttgggcgacagccattt
cctaatgttatacagctgggtctctgtgaaccagaaacttcagaagtttatcagcaagcg
aagctgcaggccaagcaggaggttgataatggaatgctctacctggagtggataaacaaa
aagaccgtcaagaatctctctcgcttagttgtccgcccccatacagatgctgtttaccat
gcttgcttttctgaggatggtcaaagaatagcttcttgtggagctgataaaaccttacag
gtgttcaaagctgaaacaggagagaaactcttagaaatcaaggctcatgaggatgaagta
ctatgctgtgcattctccacatgtaatagatttatagcgactggctctgtggataaaaaa
gtgaagatttggaattctgtgactggagaattaatacaaacctatgatgagcactcagaa
caagttaattgctgtcactttacctatagtagtcatcaccttctcttagccactggatca
agtgactgcttcctcaaactctgggatttgaatctaaaagaatgtcgaaataccttgttt
ggccatacaaatacagttaatcactgcagattttcgccagatgataagcttttggctagt
tgttcagctgatggaacattaaagctgtgggacgtgaaatcagcaaatgaaagcaaaagc
atcaatgtgaagcagttcttcctaaattcagaggagcctcaagaagacattgaagtaata
gtgaaatgttgttcatggtttgctgatggtgccaagataatggtagcagcaaaaaataag
atctttctttttgacattcatactagcagcttgttggcagaagtccacacaggccataac
agtaccattcagtattgtgacttctcccctcataatcatttagcagtggtgactctatcc
cagtactgtgtggagttgtggaatatggagtcctgcctaaaagtagctgattgcagagga
catttaagctgggttcattgtgtgatgttttctcctgatggactatcctttttgacatct
tctgatgaccagacaatcaggctttgggagacaaaaaaagtatgtgagaactcagctaaa
gtgttaaagcaagaaatagatgttttgtttcaagaaaatgaagtgatgattcttgcagtt
gacaatatacgacgtctgcaactcattagtggaaaaacaggtcaaattgatgatctcact
gaagctcaagttacctgctgttgcgtgagtccacatcttcagtatattgcatttggagat
gaagatggaaccattaaggttttggaactcctgaacagcaaaattttccaatccagaatg
ggacacaagaacattgtacgacatatccagttcacagctgatgggaagactgttatttca
agctctgatgcttctgtaattcaggtctggaattggcagtcagaggagtatgtttttctg
caagcacatcaggaaacagtaaaagattttaggctcttgaaagattcaagactcctttct
tggtcatttgatggaacagtgaaggtatggaatattattactggaaaaatagaaaaagac
tttgtttgtcatcaggatacagtactttcttgtgatatatctgtggatgctgccaagttt
tcatctacttctactgacaagactgcaaagatctggagttttgaacagttttcgcctctt
catgaattgatgggccacaagggctgtgtgcgatgctctgtcttctccatggacacgacc
ctgctggcgactggggatgacaacggagagatccggatatggaatgtctccaacggtgag
ttgcttcatttgtgtgctccagtttcaatagaaggaggaacagctactcatggaggctgg
gtgactgacctttgtttctctccagatagcagaattcttgtttctgctggaggatatctt
aagtggtggaatgttatcactggggaatccttacagaccttctacacaaatggaaccaat
ctgaagaaaattcatgtgtcccctgacttcaaaacatatgtgactgtggacaatcttgga
attttatatattttacagattttggagtaa
DBGET
integrated database retrieval system
