Suncus etruscus (white-toothed pygmy shrew): 126022296
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Entry
126022296 CDS
T09902
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
126022296 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
setr03400
]
126022296 (TDG)
Enzymes [BR:
setr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
126022296 (TDG)
DNA repair and recombination proteins [BR:
setr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
126022296 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
126022296
NCBI-ProteinID:
XP_049639120
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All DBs
Position
11:60930935..60955384
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AA seq
417 aa
AA seq
DB search
MEAENLGSCSLQQVPPPFYPLPFQQMMAEAPPLTVPNEKSVNEEPALADYPVLAPVEDTM
PETPKGRKRKTRAAQSKKPVEPKKPAEPKKSAEAKKTGKSKKSKDKQEKITDTFKVKRKV
DRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGL
SEVQLNHMDDHTLPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAV
FNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHY
YIKLKDLRDQLKGIERNTDIQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYSE
NPCSSEPGNFPANGLTVNSGEITRSDIPNGQWTTQPFTDQIPSFSDHGGTQEPDKGN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggaaaacttgggcagctgctcccttcagcaggttcctccacctttctatcca
ttaccatttcaacaaatgatggctgaagcgccccctctgacagtgccgaatgagaaatca
gtgaatgaagagccagcgctggcagactacccagtcctcgctcctgttgaggacaccatg
ccagagactccaaaaggaaggaaaagaaaaaccagagcagcacaatccaaaaagccagtg
gaacccaaaaagccagcagaaccaaaaaaatctgctgaagcaaaaaaaactggcaagtcc
aaaaaatcaaaagataagcaagaaaaaattacagatacatttaaagtcaaaaggaaagta
gaccgtttcaatggtgtttcagaagctgagcttttgacgaagactctccctgacattttg
acgtttaatctggacatcgtcattattggtataaacccaggactcatggctgcttacaaa
gggcatcattatcctggacctggaaaccatttctggaaatgtctgtttatgtcagggctg
agtgaagttcagctgaaccacatggatgaccacacgttacctgggaaatatggtattgga
ttcaccaacatggtggaaaggaccacaccagggagcaaggatctttccagtaaagaattt
cgtgaaggaggacgtattctagtgcagaaattacagaagtatcagccaagaatagcagtg
tttaatggaaaatgtatttatgaaatatttagtaaagaagtttttggagtaaaggttaag
aacttagagtttggacttcaaccccataaaatccccgacacagaaactctctgctatgtt
atgccatcatcaagtgctagatgtgctcagtttcctcgagcccaggataaagtacattac
tacattaagttgaaggacttaagagatcagctgaaaggcattgaacgaaacacagatatt
caggaggtgcaatatacatttgacttacagctggcccaagaggatgcaaagaagatggct
gttaaggaagaaaaatatgacccgggttatgaagctgcatatggaggtgcttacagtgaa
aatccatgtagtagcgaacctggcaacttccctgccaatgggctaactgtcaacagcgga
gaaataacacgcagtgacattccaaatgggcagtggacgacccagccgtttacagaccag
attccttccttcagtgaccatggtggcacacaagaacctgataaaggaaactag
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