Suncus etruscus (white-toothed pygmy shrew): 126024023
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Entry
126024023 CDS
T09902
Symbol
OTOF
Name
(RefSeq) otoferlin
KO
K19949
otoferlin
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126024023 (OTOF)
Membrane trafficking [BR:
setr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
126024023 (OTOF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
126024023
NCBI-ProteinID:
XP_049640421
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All DBs
Position
12:complement(91115508..91200862)
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AA seq
2000 aa
AA seq
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MALLVHLKTVSELRGKGDRIAKVTFRGQSFYSRVLENCEEVADFDETFRWPVASNINSNE
MLEIQIFNYSKVFSNKLVGTFRMVLQKVVEEKQVEVTDTLIDDNNAILKTSLCVEVRYQA
NDGSMGPWDDGDFLGDESLQEEEKDSQETDGLLPSSRPGSRPTGQKSFRRAGRSVFSAMK
LGKTRPHKEEPQRADEPAVLEMDDLDRLAIRLGDGLDPDSVSLASVTALTTNVSNKRSKP
DIKMEPSAGRPMDYQVSITVIEARQLVGLNMDPVVCVEVGEDKKYTSMKESTNCPYYNEY
FVFDFHVSPDVMFDKIIKISVIHSKNLLRSGTLVGSFKMDVGTVYSQPEHQFHHKWAILS
DPDDISAGLKGYVKCDVAVVGKGDNIKTPHKANETDEDDIEGNLLLPDGVPPERQWARFY
VKIYRAEGLPRMNTSLMANVKKAFIGENKDLVDPYVQVFFAGQKGKTSVQKSSYEPLWNE
QVVFTDLFPPLCKRMKVQIRDSDKVNDVAIGTHFIDLRKISNDGDKGFLPTLGPAWVNMY
GSTRNYTLLDEHQDLNEGLGEGVSFRARLMLGLAVEILDTSNPELTSSTEVQVEQATPVS
ESCTGKMEEFFLFGAFLEASMIDRKNGEKPVTFEVTIGNYGNEVDGLSRPQRPRLRSRKE
PGAEEEIDLIQNSSDEEPDEAGELVSVSSTPPMRPQITDRNYFHLPYLERKPCIYIKSWW
PDQRRRLYNSNIMDHIADKLEEGLNDVQEMIKTEKSYPERRLRGVLEELSCGCHRFLTLA
DKDQGHSSRTKLDRERLKSCMRELESMGQQAKALRAQVKRHTVRDKLRLCQNFLQKLRFL
ADEPQHSIPDVFIWMMSNNKRIAYARVPSKDLLFSPVEEELGKDCAKVKTLFLKLPGKRG
FGSAGWTVQAKLELYLWLGLSKQRQDFLCGLPCGFEEVKASQGLGLHSFPPISLVYTKKQ
AFQLRAHMYQARSLFAADSSGLSDPFARVFFINQSQCTEVLNETLCPTWDQMLVFDNLEL
YGEAHELRDDPPIIVIEIYDQDSMGKADFMGRTFAKPLVKMADEAYCAPRFPPLLEYYQI
FRGNATAGDLLAAFELLQIGPAGKAELPPVNGPVDVDRGPIMPVPVGIRPVLSKYRIEVL
FWGLRDLKRVNLAQVDRPRVDIECAGKGVQSSLIHNYKKNPNFNTLVKWFEVDLPENELL
HPPLNIRVVDCRAFGRYTLVGSCAVSSLRRFIYRPPDRAAPSWNTTVRLLRGYGMLCHAG
PHSRPTGEVVVSMEPEAPLKKLETMVKLDATSDAVIKVDVAEEEKEKKKKKKKGGSEELE
EEEPDESMLDWWSKYFASIDTMKEQLRHQEASGIDLEEKEELENTDGLKGPMKSKEKAKV
AKEEKKKKVQGPAPAPGTEVPEKKKAKIDELKVYPKELETEFDNFEDWLHTFNLLRGKTG
DDEDGSTEEERIVGRFKGSLCVYKVPLPEDVSRETGYDPTHGMFQGIPSNEPINVLVRIY
VVRATDLHPADINGKADPYIAIKLGKTDIRDKENYISKQLNPVFGKSFDVEASFPMESML
TVAVYDWDLVGTDDLIGETKIDLENRFYSKHRATCGIAQSYSLHGYNIWRDPMKPSQILT
RLCKDGKVDGPHFGPPGRVKVANRVFTGPSEIEDENGQRKPTEEHAALWALRHWEDIPRV
GCRLVPEHVETRPLLNPDKPGIEQGRLELWVDMFPMDMPAPGTPLDISPRKPKKYELRVI
VWNTDEVVLEDDDFFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRYLFPF
DYLAAEEKIVISKKESMFSWDETEYKIPARLTLQIWDADHFSADDFLGAIELDLNRFPRG
AKTAKQCSMEMATGEVDVPLVSIFKQKRVKGWWPLLARNENDEFELTGKVEAELHLLTAE
EAEKNPVGLARNEPDPLEKPNRPDTAFVWFLNPLKSIKYLICTRYKWLIIKIVLALLALL
MLGLFLYSMPGYLVKKLLGA
NT seq
6003 nt
NT seq
+upstream
nt +downstream
nt
atggctttgctagtgcatctcaagacagtctcggagctgcggggcaagggcgaccggatc
gctaaagtgacttttcgaggccagtccttctattcccgagtcctggagaactgtgaggaa
gtggccgacttcgatgagaccttccggtggccagtggccagtaacatcaacagcaatgag
atgctggagattcagatcttcaactacagcaaagtcttcagcaacaagctagtgggaacc
ttccgaatggtgctgcagaaggtggtggaggagaagcaggtggaggtgaccgacaccctg
atcgatgacaataatgccatcctaaagacgagcctatgtgtggaagtgcggtatcaggcc
aacgacggctcgatgggcccctgggatgatggggacttcctgggggacgagtccctgcag
gaggaagagaaggacagccaggagacagacggactgctccccagctccaggcccggctcc
cggcccactggccagaagagcttccgaagagctgggaggagcgtgttctccgccatgaag
ctgggcaagacgaggccgcacaaggaagagccccagagagcagatgaacctgcggtgctg
gagatggatgaccttgaccgcctggccattcgactaggagatggcttggatcctgactca
gtgtcactggcgtctgtcactgctctaaccaccaatgtctccaacaagcggtccaagcca
gacattaagatggaaccaagtgctgggcggcccatggattaccaggtcagcatcactgtg
atcgaagcccggcagctggtaggcttgaacatggaccctgtggtgtgcgtggaggtgggc
gaggacaagaagtacacgtccatgaaggagtccaccaactgcccctactacaacgagtat
tttgtcttcgacttccacgtctctcctgatgtcatgtttgacaagatcatcaagatctcg
gtcattcactccaagaacctgctgcgtagtggcaccctggtgggctccttcaagatggac
gtgggcaccgtatactcccagcctgaacatcagttccaccacaagtgggccatcctctcg
gaccccgatgacatctcagccggactcaagggctatgtgaagtgcgacgtggccgtggtg
ggcaaaggggataatatcaagacaccccacaaggccaacgagacggacgaggatgacatt
gaagggaacctcctgctccctgatggggtgccccctgagcgccaatgggcccgcttctat
gtgaagatttaccgtgcggagggcctgccccgaatgaacaccagcctcatggccaacgtg
aagaaggccttcatcggcgagaacaaggacctggtagacccctacgttcaagtcttcttt
gctgggcagaagggcaagacgtcggtgcagaagagcagctatgagccgctgtggaacgag
caagtagtcttcaccgacctctttcccccactctgcaagcgcatgaaggtccagatccga
gactcggacaaggtcaatgacgtggccatcggcacccacttcattgacctgcgcaagatt
tccaatgacggggacaaaggcttcctgcccaccctgggtccagcctgggtgaacatgtat
ggctccacccgcaactacacgctgctggacgaacaccaggacctgaatgagggcctgggt
gagggtgtgtccttccgagctcgcctcatgctgggcctggccgtggaaatcctggacacc
tcgaaccccgaactcaccagctccacagaggtgcaggtggaacaggccaccccagtctct
gaaagctgcacaggcaagatggaagaattctttctatttggggccttcctggaggcctca
atgattgaccggaaaaatggagagaagccggtcaccttcgaggtcacaatcggcaactat
gggaatgaagtcgatggcctatcccgaccccagcggccccggctacgttccaggaaggag
cctggggctgaggaagaaatagatctgatccagaactcaagtgatgaggaaccggacgag
gctggggagctggtgtccgtctcctccactccacccatgcggccccagatcactgacagg
aactacttccacctgccctacctggagcgcaagccctgcatctacatcaagagctggtgg
cctgaccagcgacgacgcctgtacaattccaacatcatggaccacatcgcagacaagctg
gaagaaggcctcaatgacgtccaggagatgatcaaaactgagaagtcctacccggagcgc
cggctgcgtggagtcctggaggagctcagctgtggctgccaccgcttcctaaccttggca
gacaaggaccagggacactcatcccggaccaagctagaccgggagcgcctcaagtcctgt
atgcgggagctggagagtatgggacagcaggccaaagcactgcgagctcaagtgaagcga
cacacggtgcgggacaaactgcggctatgccagaacttcctgcagaagctgcgcttcctg
gccgacgagccccagcacagcatccccgacgtcttcatctggatgatgagcaacaacaag
cgcatcgcctacgcccgggtgccttccaaggacctgctcttctcccccgtggaggaggag
ctgggcaaggactgcgccaaggtcaagacgcttttcctcaagctcccaggaaagcggggc
ttcggctctgcgggctggacggtgcaggccaagctggagctgtacctgtggctgggcctc
agcaagcagcgccaggacttcctgtgcggcctaccctgcggcttcgaagaggtcaaggcc
tcccagggcctgggcctacactccttcccgcccatcagcctggtctacaccaagaaacag
gccttccagctccgtgcacacatgtaccaggctcgaagcctcttcgcagctgacagcagc
ggcctctccgaccccttcgcccgagtcttcttcatcaaccagagtcagtgcaccgaggtg
ctgaatgagacgctgtgccccacctgggaccaaatgctggtcttcgacaacctggagctg
tacggggaggcccacgagctgcgtgacgatccccccatcattgtcattgagatctatgac
caggatagcatgggcaaagcggacttcatgggccgcaccttcgccaagcccctggtgaag
atggccgatgaggcatactgcgcaccccgcttcccaccgctgctggagtattaccagatc
ttccgcggcaacgccacagctggggacctgctggccgccttcgagctgctgcagattggg
cctgcagggaaggctgagctgccacccgttaatggcccagtggacgtggaccgtggccct
atcatgcccgtgcccgtgggtatcaggcctgtgctgagcaagtaccgaatcgaggtgctg
ttctggggtctgcgggacctgaagcgagtgaaccttgcccaggtggacaggccacgagtg
gatattgagtgcgcagggaagggagtgcagtcctctctgatccataattacaagaagaac
cccaacttcaacaccctcgtcaaatggtttgaagtggacctccccgaaaatgagctcctg
cacccaccactgaacatccgtgtggtggactgccgggccttcggccgctacaccctggtg
ggttcctgtgctgtcagctccctgcgtcgctttatctaccgaccccctgaccgtgcggca
cctagctggaacaccacagtcaggctcctccggggctatggtatgctgtgccatgcgggc
ccccactctcgccccacaggggaggtggtggtgagcatggaacctgaagcgcccctcaag
aagctggagacgatggtgaaacttgacgcgacctctgacgctgtcatcaaggtggatgtg
gctgaggaggagaaggagaagaagaaaaagaaaaagaaagggggctctgaggagttggag
gaggaggagccggatgagagcatgctggactggtggtccaagtacttcgcctccatcgac
accatgaaggagcaacttcgacatcaagaggcttcaggcattgacttggaggagaaggag
gagctggagaacacggatggcctgaaggggccgatgaaaagcaaagagaaggcaaaggtt
gccaaggaggagaagaagaagaaagttcagggccctgcccctgccccaggcactgaggtc
ccagagaagaagaaagcgaagatcgatgagttgaaggtgtatcccaaagagctggagaca
gagtttgacaactttgaggactggctgcacactttcaacctgctccggggcaagacgggg
gatgacgaagatggctccacagaggaggagcgcatcgtgggccgcttcaagggctccctc
tgcgtgtacaaagtgccgctcccagaagacgtgtctcgagagacaggctacgaccccacc
catggcatgttccaaggcatccccagcaatgagcccatcaacgtgctggtccgcatctac
gtggttcgggccacagatctgcaccccgcagacatcaatggcaaggccgatccctacatc
gccatcaagctgggcaagaccgacatccgtgacaaggagaactacatttccaagcagctc
aacccagtttttgggaagtcttttgacgtcgaggcctccttccccatggagtccatgctg
actgtggctgtctacgactgggacctagtgggcaccgatgatctcattggggagaccaag
attgacctggagaaccgcttctacagcaagcatcgagccacctgtggcattgctcagtcc
tattccttgcatggctacaatatctggcgggaccccatgaagcccagtcagatcctgacc
cgcctctgcaaggacggcaaagttgacggcccccactttggacccccaggaagagtgaaa
gtagccaaccgagttttcactgggccctcagagatcgaggacgagaatgggcagcggaag
cccacggaggagcacgcggcgctgtgggcactgcggcactgggaggacattcctcgagtg
ggctgccgtctggtacctgaacacgtagagacaaggcctctactcaaccctgacaagccg
ggtatcgagcagggccgcctggaactgtgggtggatatgttccccatggacatgccagcc
cctgggacgcctctggacatctcccccaggaagcctaagaagtacgagttgcgtgtcatc
gtgtggaacacggatgaggtggtcctggaggacgacgactttttcacgggggagaaatcc
agtgacatttttgtgcgggggtggctcaagggccagcaggaggataaacaggacacggac
gtacactaccactccctcacgggtgagggcaacttcaactggcgctacctgttcccattc
gactacctggcggccgaggagaagattgtcatctccaagaaggaatctatgttttcgtgg
gacgagacggagtataagatccccgcacgcctgacgctgcagatctgggatgctgaccac
ttctcggccgacgacttcctgggtgccatcgagctggacctgaaccgattccctcgaggc
gccaagacggccaagcagtgcagcatggagatggccacgggagaagtggatgtccccctc
gtgtccatcttcaagcagaagcgcgtcaaaggctggtggccactcctggctcggaatgag
aacgatgagtttgaactcacgggcaaagtggaggctgagttgcacctgctgacggcggag
gaggcagagaagaacccggtgggcctggcccgcaatgagcccgacccactagagaagccc
aaccggcctgacacggccttcgtctggttcctcaacccgctcaagtctatcaagtacctc
atctgcacccgctacaagtggctcatcatcaagatagtgttggcgctgttggcgctgctc
atgctgggcctcttcctctacagcatgcccggctacttggtcaagaagcttctgggcgcc
tga
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