Suncus etruscus (white-toothed pygmy shrew): 126024175
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Entry
126024175 CDS
T09902
Symbol
PTCD3
Name
(RefSeq) pentatricopeptide repeat domain-containing protein 3, mitochondrial
KO
K17659
pentatricopeptide repeat domain-containing protein 3
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
setr03029
]
126024175 (PTCD3)
Mitochondrial biogenesis [BR:
setr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
126024175 (PTCD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rib_mS39_PPR
PPR_2
PPR_3
PPR_long
PPR
RPM2
DUF4269
FH3_FHOD1-3
Marek_SORF3
Motif
Other DBs
NCBI-GeneID:
126024175
NCBI-ProteinID:
XP_049640571
LinkDB
All DBs
Position
12:52652581..52683811
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AA seq
692 aa
AA seq
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MAAAASGLCSGARCWLGLPLTGRHIGLCGRALRCRSYSGSVNVSKAEGTEGIEEVVIPKK
KTWDKVAVLQALASTVNRDATAAPYSFLDDPFLIPTSSSESHSFLLAKKSGENAAKFIIN
SHPKYFQKDVAEPHIPCLMPEFFEPQIEDVSEAALQERIKLRRVKASVNMFDQLLQAGTP
VSLETTNSLLDLLCYYGDQEPSANHHFQQQSQEMEETTEEDSEKTTKKPAHQLNKVTWRT
KNNAVRIFGLMPEKNAHSYCTMIRGMVKHRAHMEALNLYTELLNNRLNADVSTFNALIEA
TTWMPSEKFEEKWNNVLELLKQMAAQKVKPNLQTFNMILKCLRRFYAFGKLPALQTFREM
KAIGIEPSLATYHYLIQLFYQHENPSKGSSLIIYEIMKELKGKTFSPKDVDDDMFFQSAM
KVCSSLRDLELAYKVHDLLNTGENWKFIGPDIRRNFYYSKFFNLICLMEQIDVTLKWYKD
LIPSLFFPHSQALIDLLQALDVANRLEVIPQIWKESKEYGHTYRNDLKEEMLMLMARDRH
EPELQMAFADCAADIRSTYESQDAKQTTPDWSANTLNCIVLLFLRAGRMQEAWKMLGLFK
KHNKIPRNDLLTELMDSAKASNSSTQAVEIVKLAQAFSLPVCEKLTQRVMTDFDLSQEQK
KALGNPSAMSSDSDSDSDSDSSDSDSDIGEVK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcagcttcgggcctctgttcgggggctcgctgctggttgggcctgcccttg
actggccggcacataggtttatgcggacgggccctccgttgccgatcttattctggaagt
gtaaatgtttcaaaggctgaaggaactgaagggattgaagaagtggtcattccgaaaaag
aaaacatgggataaagtagctgttcttcaggcacttgcatccacagtaaacagggatgcc
acagcagccccatactcctttttggatgatccttttctcataccaacatcatcatctgaa
tctcattcatttttgttggcaaagaagtctggggaaaatgcagcaaaatttattattaat
tcacatcccaagtactttcagaaggacgtggctgaacctcatataccgtgtctgatgcct
gagttcttcgaacctcagattgaggatgtcagtgaggctgctctgcaggaacgaatcaaa
ctcaggagagttaaagcgtctgtgaacatgtttgatcagctcttacaagcaggaacaccg
gtgtctctggaaacaaccaatagtcttttggatttattgtgttactatggtgaccaagaa
ccctcagctaatcaccattttcaacaacaatcacaagagatggaagaaaccacggaggaa
gatagtgagaaaactacaaagaagcctgctcatcagttaaacaaagttacttggcggact
aaaaacaatgctgtaaggatctttggtctaatgccagagaaaaatgcacactcctattgc
accatgatccggggaatggtgaagcaccgagctcatatggaagcattaaacttgtacact
gaattattaaacaacagactcaatgctgatgtgtccactttcaatgcattgattgaagca
acaacatggatgccaagtgaaaaattcgaagagaaatggaataatgtgctggagctgctc
aaacaaatggctgcacagaaggtaaagccaaatctgcagacttttaatatgattctgaag
tgtctccgaagattttatgcatttggaaaattaccagccttacaaacctttcgggaaatg
aaagccatcggaatagagccctcgcttgcaacatatcactatctcattcagctgttttat
caacatgaaaacccttcaaaaggctcatcactcataatctatgaaatcatgaaagaattg
aagggaaagacattttccccaaaggatgtggatgatgatatgtttttccagtcagccatg
aaagtttgctcatctctcagagatctggaactggcctacaaagtacatgaccttttaaat
actggggaaaattggaaatttattggccctgacattcggcgtaatttctactattctaag
tttttcaatttgatttgtctcatggaacaaattgatgtcaccttgaagtggtataaggac
ctgataccttctctgttctttcctcattctcaagcactgatagatctgcttcaagcattg
gatgtggccaatcgtctggaagtgattcctcaaatttggaaagagagtaaagagtatggt
cacacctatcgcaatgacctgaaggaagaaatgttgatgctcatggccagggatcgtcac
gagccagagcttcagatggcatttgctgactgcgctgcagacatcagatctacttatgaa
agtcaagatgccaaacaaaccactcctgattggtctgccaatactctgaactgtatagtt
ctcctctttttaagggctgggagaatgcaggaagcctggaagatgttgggactttttaag
aagcataataagattcctagaaatgatttgctgacagaacttatggatagtgcaaaagca
tccaacagttctacacaggccgttgagattgtgaaattggctcaggccttcagtttacct
gtttgtgagaaactcacccaaagagtgatgactgactttgacctcagccaggaacaaaag
aaagccctgggaaacccaagtgcaatgagcagtgacagcgatagtgatagtgacagtgac
agcagtgacagtgacagtgacatcggtgaagttaaataa
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