Suncus etruscus (white-toothed pygmy shrew): 126024782
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Entry
126024782 CDS
T09902
Symbol
THBS1
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04015
Rap1 signaling pathway
setr04115
p53 signaling pathway
setr04145
Phagosome
setr04148
Efferocytosis
setr04151
PI3K-Akt signaling pathway
setr04350
TGF-beta signaling pathway
setr04510
Focal adhesion
setr04512
ECM-receptor interaction
setr04820
Cytoskeleton in muscle cells
setr05144
Malaria
setr05165
Human papillomavirus infection
setr05205
Proteoglycans in cancer
setr05206
MicroRNAs in cancer
setr05219
Bladder cancer
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
126024782 (THBS1)
04350 TGF-beta signaling pathway
126024782 (THBS1)
04151 PI3K-Akt signaling pathway
126024782 (THBS1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126024782 (THBS1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
126024782 (THBS1)
04148 Efferocytosis
126024782 (THBS1)
09143 Cell growth and death
04115 p53 signaling pathway
126024782 (THBS1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
126024782 (THBS1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
126024782 (THBS1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
126024782 (THBS1)
05205 Proteoglycans in cancer
126024782 (THBS1)
09162 Cancer: specific types
05219 Bladder cancer
126024782 (THBS1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
126024782 (THBS1)
09174 Infectious disease: parasitic
05144 Malaria
126024782 (THBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126024782 (THBS1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
setr00536
]
126024782 (THBS1)
Membrane trafficking [BR:
setr04131
]
Endocytosis
Phagocytosis
Opsonins
126024782 (THBS1)
Glycosaminoglycan binding proteins [BR:
setr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126024782 (THBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
cEGF
Laminin_G_3
TSP1_ADAMTS
Laminin_G_2
TSP1_CCN
EGF
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
126024782
NCBI-ProteinID:
XP_049641211
LinkDB
All DBs
Position
12:2900751..2915389
Genome browser
AA seq
1166 aa
AA seq
DB search
MGPAWALCALFLWQVCGSKLIPESAADNSVFDIFELTGSARKGPGRRLVKGPDPSSPAFR
IEDANLIPPVPDDKFQDLVDAVRAEKGFLLLASLRQMKKTRGTLLALERRDRSGQLFSVV
SNGKAGTLDLSLDVQGKQRVVSVEEALLATGQWKSITLFVQEDRAQLYVGCEKMESAELD
VPIQKIFTRDLASIARLRIAKGDVNDHFQGALQNVRFVFGTTPEDILRNKGCSSSPRILL
TLDNNVVNGSSPAIRTDYIGHKTKDLQAICGISCDELSSMFLELRGLRTIVTTLQDSIRK
VSEENKQLRKSPNCYHNGVLYKNLEAWTVDSCTECYCQNSVTICKKVSCPIMPCSNATVP
DGECCPRCWPSDSADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCEGSSVQTRTCH
LQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEARETKAC
QKDACPINGGWGPWSLWDICSVTCGGGVQKRSRLCNNPPPQFGGKDCIGDVTENQICNKQ
DCPIDGCLSNPCFVGTKCTSYPDGSWKCGACPAGYSGNGVQCRDVDECKEVPDACFNHNG
EHRCKNTDPGYNCLPCPPRFSGSQPFGRGVEHATANKQVCKPRNPCTDGTHDCNKNAKCN
YLGHYSDPMFRCECKPGYAGNGIICGEDTDLDGWPNEDLVCVVNATYHCKKDNCPNLPNS
GQEDYDKDGIGDACDDDDDNDRIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYNHNPD
QVDTDKNGEGDACAADIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLEHNPDQ
LDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDNDGIP
DDKDNCRLVPNPDQKDSDGDGRGDACKDDFDHDSVPDIDDICPENVDISETDFRRFQMIP
LDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTDRDDDYAG
FVFGYQSSSRFYVVMWKQITQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNALWHTG
NTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIYDKTYA
GGRLGLFVFSQEMVFFSDLKYECRDS
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggggccggcctgggcactctgtgccctattcctgtggcaagtgtgcggctccaagctc
attccagagtcggctgcggacaacagcgtgttcgacatcttcgagctcactgggtctgcg
cgcaagggccctggacgccggctggtgaagggccccgatccttccagtccagctttccgc
atcgaggatgccaacctcattccccctgtccccgacgacaagttccaggacctggtggat
gctgtgcgggcagagaaggggttcctcctcctggcctctctgcggcagatgaagaagacc
agaggcacgctgctggccttggagagaagagaccgctccggccagctcttcagcgtggtc
tccaacggcaaggcgggcacgctagacctgagcctggatgtgcagggcaagcagcgagtg
gtgtcggtggaagaagcgctcctggccacaggccagtggaagagcatcacgctgtttgtg
caggaggacagggcccagctctacgtcggctgcgagaagatggagagtgcggagctcgat
gtccccatccagaagatcttcaccagggacttggccagcatcgccaggcttcgaatcgca
aagggagatgtcaatgaccacttccagggagcgctgcagaacgtgcgatttgtctttgga
accacaccagaagatatcctcaggaacaaaggctgctccagctctcccaggatccttctt
acccttgacaacaatgtagtaaatggatccagtcctgccatccgtactgattacattggc
cacaagaccaaggatctgcaggccatctgtggcatctcttgtgatgagctttctagcatg
ttcttggagctccggggcttgcgcaccattgtgaccactcttcaggacagcatccgtaaa
gtgtctgaagagaacaaacagctaaggaagtcccctaactgctaccacaatggtgtcctg
tacaagaacctcgaggcatggacagttgacagctgcactgagtgttactgccagaactca
gttactatctgcaaaaaagtgtcctgtcccattatgccctgttccaatgccacagttcct
gatggagaatgctgcccgaggtgttggcccagtgactcagcagatgatggctggtcccca
tggtctgagtggacctcctgttcagtgacatgtggcaatggaatccagcagcgtggccgt
tcctgcgacagcctcaacaaccgatgcgagggttcctccgtccagacacggacctgccac
cttcaggagtgtgataagagatttaaacaggatggtggctggagccactggtccccatgg
tcctcttgctccgtgacctgtggtgatggtgtgatcaccaggatccggctttgcaactct
cccagtccccagatgaatgggaaaccgtgtgaaggtgaagctcgggagaccaaagcctgc
cagaaagacgcctgccctataaatggaggctggggtccctggtcactatgggacatctgt
tctgtcacctgtggaggaggggtacagaaacgtagcaggctctgcaacaaccccccaccc
cagtttggagggaaggactgcattggggatgtgacagaaaaccagatctgcaacaagcaa
gactgtcccattgatggatgtctgtccaatccttgctttgttggcaccaagtgtactagc
taccccgatggcagctggaaatgtggtgcatgtcctgctggctacagtggaaatggtgtt
cagtgcagagatgttgacgagtgcaaagaagtgccagatgcctgcttcaaccacaatgga
gagcacaggtgtaagaacacggaccccggctacaactgcctgccctgcccaccacgtttc
tctggctcacagccctttggccggggtgtggaacatgccactgctaacaaacaggtgtgc
aagccccgtaacccctgtacagatggtacacatgactgcaacaagaatgccaagtgcaac
tacctgggccattacagcgaccccatgttccgctgtgagtgtaagcccggctatgcaggc
aatggcatcatctgcggggaggatacagacctggatggctggcccaacgaggacctggtg
tgcgtggttaatgccacctaccattgcaaaaaggataactgtcccaaccttcccaactca
ggacaggaagactatgacaaagatggaatcggtgacgcctgtgatgacgatgatgacaat
gataggattccagatgatcgggacaactgtccattccattacaacccagcccaatatgac
tatgacagagatgatgtgggagaccgctgtgacaactgcccctacaaccacaatccagat
caggtggacacagataaaaatggggaaggagatgcctgtgctgcagatattgatggggat
ggtatcctcaatgagcgtgataactgccagtatgtctacaatgtggatcagagggacaca
gatatggatggtgttggagaccagtgtgacaactgtcccctggaacacaatcccgatcag
ctcgactccgactcagaccgcattggtgacacctgtgacaataatcaggatattgacgaa
gatggccaccagaacaacctggataactgcccctatgtgcccaatgccaaccaggccgac
cacgacaaagatggcaagggagatgcctgtgatcatgatgatgacaatgatggcattcct
gatgacaaggacaattgtaggctggtgcccaatcctgatcagaaagactctgatggtgat
ggtcgaggggatgcttgcaaagatgactttgatcatgacagtgtgccagacattgatgac
atctgtcctgaaaatgttgatatcagtgagactgatttccgcagatttcagatgattcct
ctagatcccaaagggacatcccagaatgaccctaactgggttgtacgccatcagggtaaa
gaactcgttcagactgtcaactgtgatcctggacttgctgtaggctatgatgagttcaat
gccgtggacttcagtggcaccttcttcatcaacactgatcgggatgatgactatgctgga
tttgtgttcggctaccagtccagcagccgcttctacgttgtgatgtggaaacaaatcact
cagtcctattgggataccaatcccactagggctcaaggatattcaggcctttctgtgaaa
gttgtgaactccaccactgggcctggcgagcatctacggaatgccctgtggcacacgggc
aatacacctggccaggtgcgcaccctgtggcatgacccccgtcacatcggatggaaggat
ttcacagcctaccgatggcgtctcagccacaggccaaagacaggtttcatcagagtggtg
atgtatgaagggaagaaaatcatggctgactcaggacccatctatgataaaacctacgct
ggtggtagactcgggctgtttgtcttctctcaagaaatggtcttcttctctgatctgaaa
tatgagtgcagagattcctaa
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