KEGG   Suncus etruscus (white-toothed pygmy shrew): 126026136
Entry
126026136         CDS       T09902                                 
Symbol
TIAM1
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor TIAM1
  KO
K05731  T-lymphoma invasion and metastasis-inducing protein 1
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04014  Ras signaling pathway
setr04015  Rap1 signaling pathway
setr04024  cAMP signaling pathway
setr04062  Chemokine signaling pathway
setr04530  Tight junction
setr04810  Regulation of actin cytoskeleton
setr05205  Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:setr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04014 Ras signaling pathway
    126026136 (TIAM1)
   04015 Rap1 signaling pathway
    126026136 (TIAM1)
   04024 cAMP signaling pathway
    126026136 (TIAM1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    126026136 (TIAM1)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    126026136 (TIAM1)
 09150 Organismal Systems
  09151 Immune system
   04062 Chemokine signaling pathway
    126026136 (TIAM1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    126026136 (TIAM1)
SSDB
Motif
Pfam: PH_Tiam1 Tiam_CC_Ex RhoGEF PH RBD PH_9 PDZ PDZ_2 PDZ_6 SOS1_NGEF_PH PH_11 RNA_pol_Rpc82
Other DBs
NCBI-GeneID: 126026136
NCBI-ProteinID: XP_049641803
LinkDB
Position
13:44872717..45088767
AA seq 1595 aa
MGNAESQNVEHEFYGEKHASLGRKHTSRSLRLSHKTRRSRHASSGKVIHRNLDASTRSSS
TPSIPQSLAENGLEPFSQEGPLEDFESPIWVDRVEMGLRPVSYTDSSIVLTATSVQSMPE
PEQSRLYSGDARYLAEGGLQQRPYTCHGPVFMETASFKKKRSKSADIWREDSLEFSLSDL
SQEHLTSNEEILGSAEEKEGEETRGMGTQASPRPLSAGQRANSLGSLYAQQKSVAGTANG
GQRSKFAGYGRNLVSDIPDLATHKMPAPATEEALPPYSNYNTLPCRKSHCLSEGATNPQI
SHSNSMQGRRAKTTQDVNAGEGSEFADSGIEGATIDTDLLSRRSNATNSSYSPPTGRAFV
GSDSGSSSTGDAARQGVYENFRRELEMSTTNSESLEETGSAHSDEQSSGTLSSPGQSDIL
LTAAQGTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYESDGRSGID
HNSIPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTTSQTELENWITAIHSAC
AAAVARHHHKEDTLRLLKSEIKKLEQKIDMDEKMKKMGEMQLSSVTDSKKKKTILDQIFV
WEQNLEQFQMDLFRYRCYLASLQGGELPNPKRLLAFASRPTKVAMGRLGIFSVSSFHALV
AARTGETGVRRRTQAMSRSASKRRSRFSSLWGLDTTSKKKQGRPSINQVFGEGTDSVKKS
LEGIFDDTVPEGKRDKDMVLPSVHQHNPDCDIWVHEYFTPSWFCLPNNQPALTVVRPGDT
ARDILELICKMHQLDHSAHYLRLKFLIENKMQHYVPKVEEDIYELLYKEIEICPKVTQNF
QIEKSDTAGDNYGFSLSSVEEDGVRRLYVNSVKETGLASKKGLKAGDEILEINNRAAGTL
NSSVLKDFLTQPSLGLLVRTYPDPEAGVELLENPPHRVDSPSDLSDSPLAFLSSNPGHSV
CSEPSSSAETPPEDTEGPDLESSDETDHSSKTTEVAAGFCRELHEMSSSDTSPSPQDPSA
PQLATMRQLTDADKLRKVICELLETERTYVKDLNCLMERYLKPLQKETFLTQDELDVLFG
NLTEMVEFQVEFLKTLEDGVRLVPDLEKLEKVDQFKKVLFSLGGSFLYYADRFKLYSAFC
ASHTKVPKVLVKAKTDTAFKAFLDAQNPRQQHSSTLESYLIKPIQRILKYPLLLRELFAL
TDAESEEHYHLDVAIKTMNKVASHINEMQKIHEEFGAVFDQLIAEQTGEKKEVADLSMGD
LLLHTTVIWPNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLVGSHRLSIYEDW
DPFRFRHMIPTEALQVRALASADTEANTVCEIVHVKSESEGRPERVFHLCCSSPESRKEF
LKAVHSILRDKHRRQLLKTESLPSSQQYVPFGGKRLCALKGARPAMSRAVSAPSKSLGRR
RRRLARNRFTIDADAISASSPEKEPQQPPGSGRWQWRGDTDRWVEEQFDLAQYEEQEDIK
ETDILSDDDDFCEALQGQQCHRGPXTAGAAAGQRPSGSGESAGRRALNSHASRMTQLKKQ
AALSGINGAPESTSEEVIWVRREDFAPSRKLNTEI
NT seq 4788 nt   +upstreamnt  +downstreamnt
atgggaaacgctgaaagtcagaatgtagagcatgagttttatggagagaagcacgccagc
ctggggcgcaagcatacgtcccgctctctgcgcctgtcgcacaagacacggaggagccgg
cacgcgtcctcgggcaaggtgatccatcgcaacttggatgccagcactcgctccagcagc
acgcccagcatcccccagtccttggccgaaaatggcctggagcccttctcccaggagggg
cccctggaggatttcgagagccccatctgggtggaccgggtagagatgggcttgagaccc
gtgtcctacaccgactcgtccatcgtgctcacggccacctcggtgcagagcatgccagag
ccggagcagagccggctgtacagcggcgacgcgcgctacttggcagagggtggcttgcag
cagcggccctatacgtgccacgggcctgtgttcatggagacggcgagctttaagaagaag
cgctccaaatccgcagacatctggcgggaggacagcctggagttctccctctccgatctg
agccaagagcacttaaccagcaacgaggagatcttgggttccgcggaggagaaggagggt
gaggagaccagggggatgggcacccaggcgagcccacggccactgagcgccggccagcgt
gccaactccctgggcagcctgtacgcgcagcagaagtctgtggccggcactgccaatggg
gggcagaggagcaaatttgcaggctatggccggaatctggtgtcagatattcctgatctg
gcgacccacaagatgccagcacctgccacggaagaggcgcttcctccctacagtaattac
aacacgctgccctgcaggaaatcgcactgtctatccgagggggccaccaacccccagatc
agccacagtaacagcatgcaaggcagacgagctaagaccactcaggatgttaacgcaggc
gagggcagcgagttcgctgacagcgggatcgaaggtgccaccatcgacaccgacctcctg
tccaggcgatccaatgccaccaactccagctactcaccaccgacgggccgcgccttcgtg
ggcagcgacagcggcagcagctccaccggggatgccgcccgccagggtgtgtacgagaac
tttcggcgggagctagagatgagcaccaccaacagtgagagcctggaggagactggctcg
gcacacagcgatgagcagagcagtggcaccctcagctctccgggccagtccgacatcctg
ctgacggccgcccagggcacggtgcgcaaggcgggcgccctggccgtcaagaactttctg
gtgcacaagaagaacaagaaggtggagtcagccacacggcgcaagtggaagcattactgg
gtatccttgaaagggtgcacactttttttctacgagagtgacggcaggtctggaattgac
cacaacagcatccccaagcacgccgtgtgggtggagaacagcattgtgcaggccgtgcct
gagcaccccaagaaggatttcgttttttgcctcagcaactccctgggtgatgccttcctc
tttcagacgaccagccagacggagcttgaaaactggatcaccgccatccactctgcctgt
gcagccgctgttgcgagacaccaccacaaagaagacacgcttcggcttctaaagtctgag
attaagaaattggagcaaaagattgatatggatgaaaagatgaagaaaatgggtgagatg
cagctgtcatctgtcaccgactccaagaagaaaaagaccatattagaccagatcttcgtt
tgggagcagaaccttgaacagttccaaatggacctcttccgttaccgctgctacctagcc
agcctccagggtggggagctgccaaaccccaaaaggctacttgcttttgccagccgacca
acaaaagtggccatgggtcgcctgggaatcttctccgtctcatcttttcatgccctggtg
gcagcacgcacaggagagacgggggtgaggcggagaactcaggccatgtccagatcagcc
agcaagcgaagaagcaggttttcttccctctgggggctggacaccacttccaaaaagaag
cagggacgccccagcatcaaccaggtatttggggaaggcacggactctgtcaagaaatct
ttagaggggatatttgatgacaccgttcccgagggcaagagggacaaagacatggtccta
cccagcgtccaccagcacaatcctgactgtgacatttgggtccatgaatatttcacaccc
tcctggttctgtctgccaaataaccagccagccctgacggtggtccggccaggggacact
gcccgtgacatcctggagctaatctgcaagatgcaccaactggatcattctgcccattac
ctgcgcctgaaatttctaatcgagaacaaaatgcagcactacgtccccaaggtggaggag
gacatctatgagctgctctacaaagaaattgaaatttgtccaaaagtcactcaaaacttc
cagattgagaagtcagacacagccggtgataattatgggttctcactctcttctgtggag
gaagatggggtgcgtaggctgtatgtgaacagtgtgaaggaaactggcttagcctccaag
aaaggtctgaaagccggagatgagattctcgagattaataaccgagctgccggcaccctg
aactcatctgtgctcaaagatttcctcacacagccatcgcttggcctcctggtgaggacc
tacccagatcccgaggcaggcgtggagctgctggagaatccacctcatcgcgtggacagc
ccctcggacctcagcgacagccccctcgcctttctctccagcaacccaggacacagtgtc
tgcagtgagccaagcagcagtgctgaaacccctcccgaagacaccgaagggcctgactta
gaatcctcagatgagacggatcacagcagcaagacaaccgaagtggctgccggtttttgc
cgggagctgcatgagatgagctcctcggacaccagcccatctcctcaggaccccagtgcc
ccacagctggccaccatgaggcagctcacagacgccgacaagctgcgcaaggtcatctgt
gagcttctggagacagagcggacctacgtgaaggacttaaactgtctcatggagagatat
ctgaaacctctgcaaaaggaaacttttcttacccaagatgagcttgatgtgctctttgga
aatttgaccgaaatggtggagtttcaagtcgaattcctaaaaacgctagaagatggtgtg
agactggtccctgatttggaaaagcttgagaaagtcgatcagtttaagaaagtgctgttc
tcgctgggaggctccttcctgtactatgctgaccgcttcaagctttacagtgccttctgc
gccagccacacaaaggttcccaaagtcctggtgaaagccaagacggacacggctttcaag
gcgttcctggatgcccagaacccgaggcagcagcactcgtccactctggagtcttacctc
atcaagcccatccagaggattctcaagtacccactgctgctgcgggagctgtttgctctt
acagatgctgagagcgaggagcactaccacttggatgtggccatcaagaccatgaacaag
gttgcaagccacatcaatgaaatgcagaaaattcacgaagagtttggagccgtatttgac
caactgattgcggagcaaactggggagaaaaaggaggttgcagatctgagcatgggtgac
ctgcttttgcataccacagtgatttggccaaacccaccagcctccctgggaaagtggaag
aaggagcctgaattggcggcctttgtcttcaaaactgctgtggtcctggtgtacaaagat
ggttccaaacagaagaagaaactcgtaggatctcaccgactttccatctatgaggactgg
gaccccttccggttccggcacatgatccctaccgaggctctgcaggttcgagctttggca
agtgcagatacagaagccaacaccgtgtgtgaaattgtccatgtaaaatcagagtctgaa
gggaggccggagagagtcttccacttgtgctgcagctctccagagagccggaaggaattc
ctgaaggcggtgcactccatccttcgtgacaagcacagaagacagctcctcaaaaccgaa
agccttccctcatcccagcaatatgtcccctttggaggaaaaagattgtgtgcgctgaaa
ggggccagaccagccatgagcagggcagtatctgcccccagcaagtctctggggagaagg
cggcggcggctggctcgtaacaggtttaccattgacgccgatgccatctctgcaagcagc
cccgagaaggagcctcagcagccccccggcagcggccggtggcagtggcggggcgacact
gatcgctgggtcgaggagcagtttgatctggctcagtacgaggaacaggaggacatcaag
gagacagacatcctgagcgatgacgatgacttctgtgaggcccttcaagggcagcagtgc
caccgaggaccgtgaactgcaggagcggctgcaggccaacgtccatcgggcagcggggag
agcgcgggtcgccgggccctgaacagtcacgcatcccgcatgacacagctcaagaaacag
gcagccttgtctggcatcaacggtgcaccagagagcaccagcgaggaggtcatctgggtc
cgtcgtgaagactttgctccctccaggaaactgaacacagagatctga

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