Suncus etruscus (white-toothed pygmy shrew): 126027085
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Entry
126027085 CDS
T09902
Symbol
NOD2
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04621
NOD-like receptor signaling pathway
setr04668
TNF signaling pathway
setr05152
Tuberculosis
setr05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
126027085 (NOD2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
126027085 (NOD2)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
126027085 (NOD2)
09163 Immune disease
05321 Inflammatory bowel disease
126027085 (NOD2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
setr04054
]
126027085 (NOD2)
Pattern recognition receptors [BR:
setr04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
126027085 (NOD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
CARD
NLRC4_HD2
LRR_6
NOD2_WH
LRR_4
AAA_29
AAA_16
AAA_25
AAA_22
ABC_tran
NB-ARC
nSTAND3
FtsK_SpoIIIE
G-alpha
AAA_30
Viral_helicase1
T2SSE
AAA_7
Motif
Other DBs
NCBI-GeneID:
126027085
NCBI-ProteinID:
XP_049642021
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All DBs
Position
14:44540523..44566222
Genome browser
AA seq
1009 aa
AA seq
DB search
MCTQEAFQAQRAQLVQQLISGSLEGFETILDWLLAWGVLSWEEYEGLRLLGQPLSQLARH
LLDTIWKKGAWGCEQLIAALQKAQAHSKAPELPDSWNLHSPCHDLQSHRPAIIRRLYSHV
DDVLERAQDQGFVSKYECDEIRLPILTSSQRARRLLDLATVKSNGLAAFLLHHIQELPVL
SSLSFEDAAHKKYISKLRITVSAQSRFLSTYDGAENLCLEEIYTENVLEIHTEAGLAGPS
QENLRLEDLFNTRGHLNQDADTILVVGEAGSGKSTLLQQLLLLWASGHDFQEFLFVFPFS
CRQLQCVAKPLSVQTLLFEHCCWPDVGQSDIFQFLLDHPDRVLLTFDGFDEFKFRFSDRE
RHCSPTEPTSIQNLLFNLVQGNLLKNACKVLTSRPGAVSALLRKYIRAEYTLKGFSEEGI
AGYLRKCHREPGVANRLISLLQASPTLHGLCHLPVFSWMVSKCHQELLLQGGGSLKTTTD
MYLLILRHFLLHASPADSAVPSSVPCPLQARFPTLLHLGRLALWGLGMCCYVFTDKQLQE
ACVDSEDISLGFLVRTQRTGSQGMATLEFLHITFQCFFAAFYLVLSADVPTSSLRHLFRC
GRPGGRFLDRLLPVLCVPGSGSKEGGGVAALLLEAEPHNLQVTATFLAGLLSQKHRELLA
GCQAPKEALLKRQACAHRCLARSLRQHFRCIPAAVPGEAKSMHAMPDFVWLIRSLYEMQE
ERLARQAVRRLDVEHLKLTFCGVGPTECAALAFVLRHLRRPVALQLDHNSVGDIGVEQLL
PCLGVCKALYLRDNNISDRGICLLVERALHCEPLQKLALFNNRLTDGCARSLAQLLACKQ
NFLALRLGNNHFTAAGAQVLAEGLRGNISLQFLGFWGNKVGDQGAQALAEALRDHQNLKW
LSLVGNNIGPVGAQALALMLEQNVALEELCLEENQLLDEGVCSLAEGMKRNSCLKVLKLS
NNGITFLGATALLQALERNNTLQEVWLRGNIFSPEELEKLSHQGSTLLL
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgtgcacgcaggaggctttccaggcacaaagggcccagctggtgcagcagctcatctct
ggttctctagagggtttcgaaaccattttggattggctgctggcatggggtgtcttgtcc
tgggaggaatatgagggcctcagactcctgggccagcccctctcccaattggccaggcac
ctcctggacactatctggaagaagggtgcttggggttgtgagcaactcattgccgccctg
caaaaggcccaggcccacagcaaggcccctgagctcccagacagctggaacctccactca
ccctgccatgacctgcaaagccaccggcccgccatcatcagaagactctacagccatgtg
gacgatgtgctggaacgggcacaggatcaaggctttgtcagcaaatatgagtgtgatgaa
atcaggctgcccatcctcacgtcatcccagcgggcacgaaggctccttgaccttgccaca
gtgaagtcaaatggactggctgccttccttttacatcatattcaagagttgccagtgctt
tcatctctgtcttttgaagatgctgcacataagaagtacatttccaaactcaggatcact
gtttccgcacagtcccgtttcctgagcacctacgatggggcagagaatctttgcttggag
gaaatatacacagagaatgttctggagatccacacagaggcaggcttggctggaccctcc
caggagaacctgaggctggaggacctcttcaatacccgtggccatctcaaccaggatgca
gacaccatactggtggtgggtgaggcaggcagtggcaagagcacactcttgcagcagtta
ctgctgctctgggcctcaggccacgacttccaggagtttctctttgtcttcccattcagc
tgccggcagctgcagtgcgtggccaagccgctgtctgtgcagacgctgctctttgagcac
tgttgttggcctgatgtgggccaatctgacatcttccagtttctccttgaccatcctgac
cgcgtcctcttaacgttcgatggctttgatgagttcaagttcaggttctcagaccgtgag
cgacactgttctccaactgagcccacatctatccagaatctgctttttaaccttgtgcag
ggcaacttgctgaagaacgcctgcaaagtgttgaccagccgcccaggtgcagtgtcggcc
ttgctcaggaagtacattcgggcagagtacaccttaaagggcttctcagaagagggcatt
gccgggtatctgaggaagtgccaccgagagccgggtgtggccaaccgccttatcagcctt
ctccaagccagcccgaccctgcatggtttatgccacctccccgtcttctcgtggatggta
tctaaatgccaccaggagttgttgctgcagggtggaggctccctgaagaccaccacagac
atgtacctgctgattctgcggcattttctgctccatgcctccccagcagactcagctgtc
cccagctcagtcccctgcccattgcaagctcggttccccaccctcctgcaccttggccgc
ctggccctctggggcttgggcatgtgctgctatgtgttcacagacaagcagctccaggag
gcttgcgtggattccgaggacatctctcttggcttcctagtgcgcacccaaaggacgggg
tcccagggcatggcaaccctggaattcctacatatcacctttcagtgtttttttgccgcc
ttctacctcgtgctcagtgctgatgttccaacatcctcactcaggcatctcttcagatgc
ggcaggcctggtggccggttcctggacagactgctgcctgtgttgtgtgtgccaggctca
ggaagcaaagagggcggaggagtggcagctctgttgctggaggctgagcctcacaacctg
caggtgacagccactttcctggcggggctattgtcccagaaacacagggaactgttggct
ggctgccaggccccaaaggaggccctgcttaagcgccaggcctgtgcccaccggtgtttg
gcccgcagcctccgccagcacttccgctgcatccctgcagcagtgccaggggaggccaag
agcatgcatgccatgcctgactttgtctggctcatccggagcctgtacgagatgcaggag
gagcggctggcacggcaggctgttcggaggctggacgttgagcatctcaaactgaccttc
tgtggtgtgggtccaaccgagtgcgctgccctggcttttgtgctgcgtcaccttcggcgg
cccgtggccttgcagttggaccacaattcagtgggcgacattggtgtggagcagttgctg
ccttgcctcggtgtctgcaaagcactttatttacgagacaacaacatctcagaccgaggc
atctgcttgctggtggaacgtgccctccactgtgagccactgcagaagttagctcttttc
aacaacagattgactgatggctgcgcccgctccctcgcacagctccttgcttgcaagcag
aactttctggcgttaaggctgggcaataaccacttcactgctgcgggtgcccaggtgctg
gctgaggggctcagaggcaacatctccttgcagttcctggggttctggggtaacaaagta
ggtgaccagggtgcccaggccttggctgaagctctgagggatcaccaaaacctaaagtgg
ctcagcctggtaggtaacaacattggccctgtgggtgctcaagctttggcgttgatgttg
gagcagaacgtggccctggaagaactctgcctggaggagaaccagctcctggatgaaggc
gtgtgttctcttgctgaagggatgaagagaaattcctgtctgaaagtcctcaagttgtcc
aacaatggcatcaccttccttggggccactgccctcctgcaggcccttgaaaggaacaac
accctccaggaagtctggctccgaggaaacattttctctcctgaggagctggagaagctc
agccaccagggcagcacactcttgctttga
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