Suncus etruscus (white-toothed pygmy shrew): 126027810
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Entry
126027810 CDS
T09902
Symbol
NLRP1
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
126027810 (NLRP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126027810 (NLRP1)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
setr04054
]
126027810 (NLRP1)
Membrane trafficking [BR:
setr04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
126027810 (NLRP1)
Pattern recognition receptors [BR:
setr04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
126027810 (NLRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
CARD
NLRC4_HD2
PYRIN
NOD2_WH
AAA_16
NB-ARC
LRR_6
NPHP3_N
AAA_30
AAA_22
AAA_14
ATPase_2
nSTAND3
Birna_VP5
RsgA_GTPase
DUF815
AAA
CARD_2
TsaE
Motif
Other DBs
NCBI-GeneID:
126027810
NCBI-ProteinID:
XP_049642819
LinkDB
All DBs
Position
1:complement(154431288..154475637)
Genome browser
AA seq
1348 aa
AA seq
DB search
MASKIQLLLTSYLDILSKKDLEEFLLQLMDKEYEGHSSKMTPFQLEKANGMKIASFLVAQ
YGEQKAWELAILTWEKMGLKELSALAKEQSNFRSWTCSPSKPNLDSPNWPTPSSVVGFWD
SKTSKNFQTSNERNLKCQTEKYVHTWKVSFTPHSGSFQSITNSPDHESPNQESPNAPTST
DVLRVWEPQFNLRSESRNQEVPDIEQSVMKTSGNCCTGIKKGYQSQITEIFCPTQPWKNE
SVYQNFTHLILLHRSAPRCYESLANKNWHHRMMEDPGHFIEVRDLFVPHLATQEGAHIVV
LHGNAGIGKSTLVRQVRKAWEEGQLFRDYFQHVFYFNCRDLAQYKKMSLAELMAKDWPSP
ETIIGQIISQPKKLLFIFDGLGEPRWVLKKKNSDLCVHWSQQQSLKALLSSLLEKTILPE
ASLLITTRTTNLWKLIPSLKQSRWVEILGFSESGRKDYFYKFFTDESQASRVFNLVESNK
ALWTMCLIPWVSWLVCTCLKQQMEQGQELSLTCQTTTSLCLQYLSQALPAQSLGMQLGGL
CSLAAECTWKGNTLFSLEDLKKHKLDELFISTLLHVSIIEKHPISLKYNFIQPCFQEFFS
AMSCIFGSNSPNANSVKNFQGIFYWPDSGKANTHFLFGLLSEQGLREMERVFNHTPSREK
KWELLSWAQKEFQNNHSSVQSNLQLFHCLYEIQDQDFLLLAMAYFQGTRIFIQTNMEFLV
FTFCIKFCPHLKRLQLNESGQHGQEWSPLNVVVFTRFSITDTCWQFLFSVLGISESLKEL
DLSGNFLSDNAVEHLFEALKYPDCHLEILRLVNCSLTSSCCQSLASMLSVNTSLTELDLQ
QNDLGNLGVNLLCEGLRHPSCQLRLLRLEQTQLSEDVKEMLRNLKEEKPQLIIAGIWKPI
EMKPNESTREGNMSDYAFKRKRSESEGSSPQIAPVNTLCLSSPYSSEELHIEIMGTRDYF
WGPTGPMTIEVLNKERNLYRVHLPKAGSYYWPNTGLHFVVRRPVTVEIESLAWDQFLSRI
VQEHSWMIVGPLFGIKTEPGAVKAVYLPHFVAFQEGPVDISQFYVAHFKDEGMVLEKPDR
VEPGYTVLENPSFSPLGVVLRMIHTTLSFIPITSSVLLYYHLQPEEVIFHLYLIPSDCSI
QKAIDDEEKKFQFVRIHKPPPLTSLYLGSRYTVSGSKKMEVIPQELELCYRSPNQSQLFS
EIYVGRMKSEIRIHIKNKKDEIIVWEALVKPGDLRPEAPSVTPVPIAISLLPLDVPTLLH
FVDQCREQLVTRVTSVDSILDKLLGPVLTEEEYETVRAETTNQNQMRKLFDFSRSWDWAC
KDRFYEALKEIHPHLIRELWQVGGSAGK
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atggccagtaaaatacagttgctgctgactagttacctggatatactaagcaagaaagat
ctcgaagagtttctgcttcaattgatggataaagaatatgaaggacattcaagcaaaatg
acaccttttcaactagagaaggcaaatggcatgaaaatagcctcattcctggtggctcag
tatggggagcaaaaagcctgggagttggcaatccttacatgggaaaagatgggactgaaa
gagctgagtgccctagccaaagaacagtctaacttcagatcctggacttgttccccaagt
aaacccaaccttgattcaccaaattggcccaccccctcaagtgtggttgggttctgggac
tctaaaacctcgaagaattttcagacctcaaatgaaaggaatttaaaatgccagactgaa
aaatatgtacatacctggaaagtgagctttactccacattccggtagttttcaaagtatt
acgaactctccagaccacgaatctccaaaccaggagtcacctaatgcccccacatccact
gatgtgctcagagtctgggaacctcaatttaatctcaggtcagagtccagaaatcaagaa
gttcctgatattgagcagtctgtgatgaaaacatctggaaactgctgcacaggaattaaa
aaaggataccaaagtcaaataacagagatattctgtcccacacaaccttggaagaatgag
agtgtataccaaaacttcacacatctgatacttctacacagatcagccccccgatgctat
gaatccctagccaataaaaactggcatcatcgaatgatggaggatccaggacattttatt
gaagtcagagatttatttgtcccacacctggctacccaggaaggggctcacatcgttgtt
ctgcatggaaatgctgggattgggaagtctacattggtcaggcaagtgagaaaagcctgg
gaagaaggccagctatttagagactattttcaacatgtcttctacttcaattgcagagac
cttgcccagtataagaaaatgagtcttgctgagctcatggctaaagactggccttcccct
gagactatcattgggcaaatcatttctcaaccaaaaaagctgctcttcatctttgatggt
ttgggtgaaccaagatgggtactaaagaagaagaattctgacctctgtgtgcactggagt
caacaacagtcattaaaagctctgctaagtagtctgctggagaaaacaatacttcctgaa
gcatccttgcttatcacaactaggaccactaatctgtggaagctcattccttctttaaag
cagtcacgttgggtggagatcctggggttctctgagtcaggaaggaaagactatttctac
aaatttttcacagatgaaagccaagcaagtagagtctttaatttagttgaatcaaacaaa
gcactctggaccatgtgtctcataccctgggtgtcctggctggtctgtacttgcctgaaa
cagcaaatggagcaggggcaagagctttcactgacatgccagactaccacatccctctgt
cttcagtacctttcccaggctttgcctgctcagtcacttggcatgcagctggggggcttg
tgctctctggctgctgagtgtacgtggaaaggaaatacactatttagtcttgaggatctc
aagaaacacaagttagatgagttatttatctcaactctcttacatgtttctattattgaa
aaacatcctatctctctgaagtacaactttattcagccatgtttccaggagttcttttca
gccatgtcctgtatttttggaagtaattctcccaatgctaatagtgtgaaaaactttcaa
gggatattttattggcctgattctggaaaagcaaacacacatttcctgtttggtcttttg
agtgagcagggactgagagagatggagagagtttttaaccacactccatctcgggaaaag
aagtgggagctactaagctgggcccagaaggagtttcaaaacaatcattcctctgtgcag
tcaaacttgcaattattccactgtttatatgagattcaggatcaggatttcttgttacta
gcaatggcctatttccaaggaacaagaatatttattcaaaccaacatggagtttctggtg
tttactttctgcattaaattctgcccccacttgaagagacttcaactaaatgaaagtgga
cagcatggtcaggagtggagtccactcaatgtagttgtgtttaccagattctcaatcaca
gacacctgctggcagtttctcttctctgttcttgggatctctgaaagcctaaaggagctg
gatttaagtggaaacttcctgagtgacaatgcagtagagcatctttttgaggccctaaaa
taccctgactgccacctggagatcctgcggctggtcaattgtagtctcacatctagctgt
tgccagagcttggcatctatgcttagtgttaacactagcctgacagaactggatctacaa
cagaatgacctcggtaacctcggtgtgaacctgctctgtgaaggtctcaggcatccttcc
tgccaactcaggctcctgaggctagaacagacccagctgagtgaggatgtgaaggagatg
ctgagaaacctgaaggaggagaagcctcaattgatcatagctggcatctggaaaccaatt
gagatgaagcctaatgagagcaccagagaaggaaacatgagtgattatgcattcaaacgg
aagagatcagaatcagagggaagttcacctcaaatagcaccagtgaataccctctgtcta
tcctctccttactcttctgaagagctgcacatagagattatgggaactagagattacttc
tggggccccacgggtcctatgactattgaagtgcttaacaaagaaagaaacctataccga
gttcatctcccaaaagctggatcctactactggcccaacacaggtctccactttgtagtc
agaaggccagtgactgttgagattgaatcccttgcctgggaccagtttctgagcagaatt
gttcaagagcacagctggatgattgttgggcctctgtttggtatcaagactgagccagga
gccgtaaaggctgtatatctccctcattttgtagcttttcaagagggtcctgttgatatt
tcacagttctatgtggctcacttcaaagatgaggggatggtactggagaagccagacagg
gtggagccaggctatactgtcctggaaaatcccagcttttcccccttgggagttgtactg
agaatgatccatactaccctgagcttcattcctattacttcaagtgtgttgctttactat
catctgcaacctgaagaagttatcttccacctctacctgattccaagtgactgctccatt
cagaaggcaatagatgatgaagaaaaaaaatttcagtttgtgagaatccacaagccacca
ccattgacctcactttacctgggctctcgctatactgtgtctggttcaaagaaaatggaa
gtaattccccaggaactggagctctgctaccgaagccctaatcaatcccagctcttttct
gagatctatgttggacgcatgaagtcagagataaggatacatataaaaaacaaaaaagat
gaaattattgtatgggaggctttggtgaaaccaggggatctcagacctgaagccccgagt
gtcactccagtcccaattgcaatttcattgttacccctagatgtcccaactttactgcac
tttgtggaccaatgtcgagaacaattggtgactcgggtgacatctgtagactcaatcctg
gacaaactgcttggaccagtactgaccgaagaggagtatgaaacagtgagggctgagacc
accaaccaaaatcagatgagaaagctgttcgatttcagccgctcctgggactgggcctgc
aaagatcgattctatgaagccctgaaggagattcatccccatttaattagggaactctgg
caagtgggtggtagtgcaggaaagtga
DBGET
integrated database retrieval system
