Suncus etruscus (white-toothed pygmy shrew): 126030441
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Entry
126030441 CDS
T09902
Symbol
LFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr00514
Other types of O-glycan biosynthesis
setr04330
Notch signaling pathway
setr05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
126030441 (LFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
126030441 (LFNG)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
126030441 (LFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
setr01003
]
126030441 (LFNG)
Enzymes [BR:
setr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
126030441 (LFNG)
Glycosyltransferases [BR:
setr01003
]
Glycan extension
O-Glycan
126030441 (LFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
126030441
NCBI-ProteinID:
XP_049644615
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All DBs
Position
15:complement(78722275..78728195)
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AA seq
377 aa
AA seq
DB search
MLKRCGRRLLLALAGALLACLLVLTADPPPPTPLPAERGRRALRSLAAGPPAPAPGLDAA
ASAAVPAAQSRQVHSLSEYFSLLTRARGDVGPRPAHGPPRGPVEPLAPQDVFIAVKTTKK
FHRARLDLLLETWISRHKDMTFIFTDGDDEFLAKHTANVVNTNCSAAHSRQALSCKMAVE
YDQFVASGRKWFCHVDDDNYVNVRALLRLLAGFPHTQDLYIGKPSLDRPIQATERVGENK
LRPVHFWFATGGAGFCISRGLALKMRPWASGGHFVSTAERIRLPDDCTVGYIVEALLHVP
LTRSGLFHSHLENLQQVPASELQEQVTLSYGVFENKHNAVHLKGPFSLGADPSRFRSIHC
LLYPDTPWCPNSAVAVF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagcgctgcggtcgtcgcctgctgctggcgttggcgggcgcgctgctcgcctgc
ctgctggtgctcacggccgacccgccgccgcccaccccgctgcccgccgagcgcggccgc
cgggctctgcgcagcttggcggctggtcccccggccccagctcccgggctggatgcggcg
gcgtcggcggcggtgcccgcggcgcagagccgccaggtgcacagtctgtccgagtacttc
agcctgctgacccgcgcgcgcggggacgtggggccgcggcccgcccacggccctccgcgc
ggcccggtggagccgctcgcgccccaggacgtcttcatcgccgtcaagaccaccaaaaag
ttccaccgcgcgcgcctcgacctgctgctcgagacttggatctcgcgacacaaggacatg
accttcattttcaccgacggggacgatgaattcctggccaaacacacggccaacgtggtg
aacaccaactgctccgcggcccacagccgccaggccctgtcctgcaagatggccgtggag
tatgaccagttcgtggcgtcgggcaggaagtggttctgccatgtggacgacgacaactac
gtgaacgtgagggccctgctgcggctactggccggcttcccgcacacgcaggacctgtac
atcggcaagcccagcttggatcggcccatccaggccacggagcgggtgggcgagaacaag
ctgcgcccggtgcatttctggttcgccacgggcggagctggtttctgcatcagtcgcggg
ctggccctgaagatgaggccctgggccagcggtggccacttcgttagcacggccgagcgg
atccggttgcccgatgactgcacggtgggctacatcgtggaggcgctcctgcatgtgccc
ctcactcgcagcggcctcttccactcgcacctggagaacctgcagcaggtgccggcctcg
gagctgcaggagcaggtaacgctgagctacggtgtgttcgagaacaagcacaatgctgtg
cacctcaaggggcccttctctttgggtgccgacccctccaggtttcgctccatccactgc
ctcctatacccggacacaccctggtgtcccaactccgctgtagctgtcttctag
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