Suncus etruscus (white-toothed pygmy shrew): 126030565
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Entry
126030565 CDS
T09902
Symbol
TPCN1
Name
(RefSeq) two pore channel protein 1
KO
K16896
two pore calcium channel protein 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
126030565 (TPCN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
setr04040
]
126030565 (TPCN1)
Ion channels [BR:
setr04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
126030565 (TPCN1)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Pilin_N
ECSCR
Motif
Other DBs
NCBI-GeneID:
126030565
NCBI-ProteinID:
XP_049644738
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Position
15:21504133..21542681
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AA seq
812 aa
AA seq
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MASILDDDVPLILTLDEAGGAPLAPCNGPEEQPRRNGGTCDGLNSGTPSLSSGGESSPSS
PVGHSWEMSYQEAAIYLQEGENNDKFVTHPDNAKALAAYLFVHNHLFYLMELSTALLLLL
LSLCEAPAVPALRLGIYVHTTLELLALMVVVFELCMKLRWLGLHTFIRHKRTMVKTSVLA
VQFLEAIVVLVRQTSHVRVTRALRCIFLVDCRYCGGVRRNLRQIFQSLPPFMDILLLLCF
FMIIFAILGFYLFSSNPSDLYFSSLENSIVSLFVLLTTANFPDVMMPSYARNPWSCIFFI
VYLSLELYFIMNLLLAVVFDTFNDIEKRKFKSLLLHKRTAIQHAFRLLGRQQKLGGISYR
HFDGLMRFYKPRMSAWERYLTFKTLDQSSSSMLSLKDFYDIYEVAALKWKAKKNREHWFD
ELPRTAFLIFKGINILVKSKAFQYFMYLVVAVNGVWILVEAFMLKGGHFFSEHVPWSYLV
FLTIYGVELFLKVAGLGPVEYLSSGWNLFDFFVTAFAFLGLLTLAFNMEPFYFIVILRPL
QLLRLFKLKKRYRNVLDTMFELLPRMASLGLTLLIFYYSFAIVGMEFFCGILYPNCCNTS
TVANAYRRLNHTVGNETQVEDGFYYLNNFDHLLNSFVTLFELTVVNNWYIIMEGVTSQTS
HWSRLYFMTFYIVTMVVMTIIVAFILEAFVFRMNYSRKNKDSEVDGGITLEKELSKAELL
AILELYRTRGAASDVSRLLKLLSQMERYEQNALVFLGRRSRTKSDLSLKMYQEEIQEWYE
EHARKQEEQQRLLGGHPAIQQPPGRPRSRTIT
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgatcctggacgacgacgtgcccctcatcctgaccttggatgaggctggcggc
gccccgctggctccctgcaatggcccagaggagcagcctcgcagaaatggcggcacctgt
gatggcctcaactctgggacccccagcctgagctcagggggcgagagctccccgtcaagt
cccgtgggacacagctgggagatgagttaccaagaggcagccatctacctccaggagggc
gagaacaacgacaagttcgtcacgcaccccgacaatgccaaagcgctggcggcctacctc
ttcgtgcacaaccacctcttctacctgatggagctctccacggcgctgctgctgctgctg
ctctcgctgtgcgaggcgcccgccgtgcccgccctgcgcctgggcatctacgtccacacc
accctggagctgctggccctgatggtggtggtgttcgagctctgcatgaagctgcgctgg
ttgggcctccacaccttcatccggcacaagcgcaccatggtcaagacctctgtgctggcc
gtgcagttcctcgaggctatcgtagtgctggtccgacagacatctcatgtgcgggtgacc
cgggccctgcgctgcattttcctggtggactgtcggtactgcggtggagtgcggcgaaac
ctgcggcagatcttccagtccctgccacccttcatggacatcctcctgctgctctgcttc
ttcatgatcatcttcgccatcctcggtttctacctgttctcctccaacccctcagacttg
tatttcagcagcctggagaacagcatcgtcagcctctttgtcctgctgaccacggccaac
ttcccggacgtgatgatgccatcctacgcccgcaacccttggtcctgcatcttcttcatc
gtgtacctgtcactggagctctatttcatcatgaacctgctcctggctgtggtattcgac
acgttcaatgacatcgagaagcgcaagttcaaatctctgctgctgcataagcgcacggcc
atccagcatgccttccggctgctcggccgtcagcagaagcttggcggcatctcctatagg
cactttgatgggctgatgcgcttctacaagccccggatgagcgcctgggagcggtacctg
acgtttaagaccctggaccagagtagctcttccatgctcagcttgaaggacttttacgat
atctatgaagtggctgccttgaagtggaaggccaagaaaaatcgagagcactggttcgac
gagcttccgaggactgccttcctcatctttaaaggtatcaacatccttgtgaagtccaag
gccttccagtacttcatgtacttggtggtggcggtgaatggcgtgtggatcctggtggag
gccttcatgctgaaaggtggacactttttctctgagcacgtgccctggagctaccttgtc
ttcctcacaatctacggggtggagctgttcctcaaggttgccggcctgggccctgtggag
tacctgtcctcgggatggaacctgtttgacttcttcgtcacggccttcgccttcctgggg
ctgctgactctggccttcaacatggagcccttttacttcatcgtgatccttcgtcccctc
cagctgctgaggcttttcaagctgaagaagcgctaccgcaatgtgctggacaccatgttc
gagctgctgccgcgcatggccagcctaggcctcaccctgctcatcttttattactccttc
gccatcgtgggcatggaattcttctgtggtatcctgtaccccaactgctgcaacacgagc
acagtggccaacgcctaccgccgactgaaccacacggtggggaatgagacgcaggtggag
gacggattctactatctcaacaacttcgaccacctcctcaacagcttcgtgaccctgttt
gagctcacggttgtcaacaactggtatatcatcatggagggtgtcacctctcagacgtcc
cactggagtcgcctctacttcatgaccttctacatcgtgaccatggtggtgatgaccatc
atcgttgccttcatcctcgaggcctttgtcttccggatgaactatagtcgcaagaacaag
gactctgaagtggacggcgggatcaccctggagaaggagctgtccaaggccgagctgctg
gccatcctggagctgtaccggactcggggagccgcctcagacgtctctcggctgctcaag
ctcctctcccagatggagcgatatgagcaaaacgccctggtgtttctgggacggagatcc
aggacaaaaagtgacctgagcctcaagatgtaccaggaagagatccaggagtggtacgag
gagcatgcccgcaagcaggaggagcagcagcggctgctcggcggccaccccgccatccag
cagccccccggccggccacgctcacgcaccatcacctaa
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