Suncus etruscus (white-toothed pygmy shrew): 126030761
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Entry
126030761 CDS
T09902
Symbol
GGPS1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr00900
Terpenoid backbone biosynthesis
setr01100
Metabolic pathways
Module
setr_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
126030761 (GGPS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
setr01006
]
126030761 (GGPS1)
Enzymes [BR:
setr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
126030761 (GGPS1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
126030761 (GGPS1)
2.5.1.29 geranylgeranyl diphosphate synthase
126030761 (GGPS1)
Prenyltransferases [BR:
setr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
126030761 (GGPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
126030761
NCBI-ProteinID:
XP_049644971
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All DBs
Position
15:complement(41423215..41430326)
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AA seq
300 aa
AA seq
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MEKTQERTQNILLEPYKYLLQLPGKQVRTKLSQAFNYWLKVPQDKLQIIIEVTEMLHNAS
LLIDDIEDNSKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLL
ELHLGQGLDIYWRDNYICPTEEEYKSMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDTL
GLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQSILRQRTEN
IDIKKYCVHYLENVGSFEYTRNILKELESKAFKQIDECGGNPELVTLVKHLSKMFKEESE
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggagaagactcaagaaagaactcaaaatattcttctagaaccctacaaatacttactt
cagttaccaggtaaacaagtgagaaccaagctttcacaggcatttaattattggctcaag
gttcctcaagacaaactacagattatcattgaagtgacggaaatgttgcataatgccagt
ttacttattgatgatatagaagacaactcaaaacttcgacgtggctttccagtggcacac
agcatctatggagttccttctgtcattaattctgcaaattatgtgtacttccttggtcta
gagaaagtcttaactcttgatcacccagatgcagtcaaactttttactcgccaacttttg
gaacttcatctagggcaaggcctagatatttattggagggataattacatttgtcctact
gaagaagaatataaaagtatggtgctacaaaagacaggtggactatttggattagcagta
ggtctcatgcagttgttttctgattacaaagaagatttaaagcctttacttgatacactt
ggtctctttttccaaattagagatgattatgctaatctacactccaaagaatatagtgaa
aacaaaagcttttgtgaagatctaacagaaggaaaattctcattccctactattcatgct
atttggtcaagacctgaaagcacccaggtgcagagtatcttacgccagagaaccgaaaac
atagatattaaaaagtactgtgtacattatctggagaatgtaggttcttttgaatacact
cggaatattcttaaagagcttgaatctaaagcctttaaacaaatcgatgaatgtggtgga
aaccctgaactggtaactctagtaaagcacttgagtaaaatgttcaaagaagaaagtgaa
taa
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