KEGG   Suncus etruscus (white-toothed pygmy shrew): 126033599
Entry
126033599         CDS       T09902                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:setr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126033599 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:setr03041]
    126033599 (SMNDC1)
Spliceosome [BR:setr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    126033599 (SMNDC1)
 Complex B
    126033599 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    126033599 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 126033599
NCBI-ProteinID: XP_049646543
LinkDB
Position
17:complement(56323637..56336579)
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLTS
SDSFTSIQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEDNGTAAITFAGYGNAEVTPLL
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaggatctagcaaagcagctggcaagctacaaagctcaactccagcaagttgaa
gctgcattgtctggaaatggagagaatgaagatttgctcaaattaaagaaagacttacaa
gaagttatagaactaacaaaagaccttctgtcaactcaaccttctgaaactctgacaagt
tcagacagttttacttctatccagcctactcactcatggaaagtgggagacaagtgtatg
gcagtctggagtgaagatggacagtgttatgaagcggagattgaggagatagatgaagac
aacggcactgctgcaatcacctttgctggctatggcaatgctgaagtgactcccttattg
aacctcaagcctgtagaagaaggaaggaaggcaaaggaggacagtggcaacaaacccatg
tcaaaaaaagaaatgattgcccagcagcgtgagtataaaaagaagaaagctctgaaaaaa
gcacagagaataaaagaacttgagcaggaaagagaggaccagaaggtgaaatggcaacaa
ttcaacaacagagcatattctaaaaacaagaaaggccaggtaaagaggagtatttttgct
tcacctgagagtgtgactggcaaagttggagtagggacttgtggaattgcggataagcct
atgacgcagtatcaagatacctctaaatacaatgtcaggcatttaatgccacaataa

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