KEGG   Suncus etruscus (white-toothed pygmy shrew): 126033750
Entry
126033750         CDS       T09902                                 
Symbol
CXCL12
Name
(RefSeq) stromal cell-derived factor 1
  KO
K10031  C-X-C motif chemokine 12
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04060  Cytokine-cytokine receptor interaction
setr04061  Viral protein interaction with cytokine and cytokine receptor
setr04062  Chemokine signaling pathway
setr04064  NF-kappa B signaling pathway
setr04360  Axon guidance
setr04670  Leukocyte transendothelial migration
setr04672  Intestinal immune network for IgA production
setr04810  Regulation of actin cytoskeleton
setr05163  Human cytomegalovirus infection
setr05200  Pathways in cancer
setr05323  Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:setr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    126033750 (CXCL12)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    126033750 (CXCL12)
   04061 Viral protein interaction with cytokine and cytokine receptor
    126033750 (CXCL12)
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    126033750 (CXCL12)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    126033750 (CXCL12)
   04672 Intestinal immune network for IgA production
    126033750 (CXCL12)
   04062 Chemokine signaling pathway
    126033750 (CXCL12)
  09158 Development and regeneration
   04360 Axon guidance
    126033750 (CXCL12)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    126033750 (CXCL12)
  09172 Infectious disease: viral
   05163 Human cytomegalovirus infection
    126033750 (CXCL12)
  09163 Immune disease
   05323 Rheumatoid arthritis
    126033750 (CXCL12)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:setr04052]
    126033750 (CXCL12)
   00536 Glycosaminoglycan binding proteins [BR:setr00536]
    126033750 (CXCL12)
Cytokines and neuropeptides [BR:setr04052]
 Cytokines
  Chemokines
   126033750 (CXCL12)
Glycosaminoglycan binding proteins [BR:setr00536]
 Heparan sulfate / Heparin
  Chemokines
   126033750 (CXCL12)
SSDB
Motif
Pfam: IL8
Other DBs
NCBI-GeneID: 126033750
NCBI-ProteinID: XP_049646714
LinkDB
Position
17:33827976..33838882
AA seq 119 aa
MDAKVVALLALVLAALCLSDGKPVSLSYRCPCRFFESHVARANVRHLKILSTPNCALQIV
ARLKSNNRQVCIDPKLKWIQEYLDKALNKGSREEKVGKREKIGKKKRQKKRKAAQKRKI
NT seq 360 nt   +upstreamnt  +downstreamnt
atggatgccaaggtcgtcgccctgctggccctcgtgctggctgcgctgtgtctcagcgac
gggaaaccggtaagcctgagctacagatgtccctgccgattcttcgagagccatgttgcc
agagccaatgtcagacatctcaaaatccttagcactcccaactgtgccctccaaatcgtg
gcaagactgaagagcaacaatagacaagtgtgcattgatccaaaactgaagtggattcag
gaatacctggataaagctttaaacaaggggagcagagaagaaaaagtggggaaaagagaa
aagataggaaaaaagaagcgacagaagaagagaaaggctgctcagaaaaggaaaatctag

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