Suncus etruscus (white-toothed pygmy shrew): 126033832
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Entry
126033832 CDS
T09902
Symbol
LGI1
Name
(RefSeq) leucine-rich glioma-inactivated protein 1
KO
K25428
leucine-rich repeat LGI family member 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
126033832 (LGI1)
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Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
VWC2L_1st
LRR_9
LRRCT
LRR_14
DUF7448
Motif
Other DBs
NCBI-GeneID:
126033832
NCBI-ProteinID:
XP_049646816
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Position
17:37968992..38003419
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AA seq
641 aa
AA seq
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MQVDSLLQQLDPSHLTAPHRSFPRAVHCWSEEQLTNQLQVPVLKSRYTEAKEKGGLLCDL
VLEQDNHHLNSRSPVHVWGYFFVCMESERNQRMGNACIPLKRIAYFLCLLSALLLTEGKK
PAKSKCPAVCTCTKDNALCENARSIPRTVPPDVISLSFVRSGFTEISEGSFLFTPSLQLL
LFTSNSFDVISDDAFIGLPHLEYLFIENNNIKTISRHTFRGLKSLIHLSLANNNLQTLPK
DIFKGLDSLTNVDLRGNSFNCDCKLKWLVEWLSHTNATVEDIYCEGPPEYKKRKINSLSP
KDFDCIITEFAKSQDLPYQSLSIDTFSYMNDEYVVIAQPFTGKCIFLEWDHVEKTFRNYD
NITGTSTVVCKPIVIETQLYVIVAQLFGGSHIYKRDSFANKFIKIQDIEILKIRKPNDIE
TFKIENNWYFVVADSSKAGFTTIYKWNGNGFYSHQSLHAWYRDTDVEYLEIARTPQTLRM
PHLILSSSSQRPVIYQWNKATQLFMNQTDIPNMEDVYAVKHFSVKGDVYICLTRFIGDSK
VMKWGGSSFQDIQRMPSRGSMVFQPLQINNYQYAILGSDYSFTQVYNWDAEKAKFVKFQE
LNVQAPRSFTHVSINKRNFLFASSFKGNTQIYKHVIVDLSA
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtcgactctctcctccagcagttggatccctcccatctcacagcacctcacagg
tcctttcccagagcagtgcattgctggagcgaggagcagctcacgaatcagctgcaggtc
cctgttttgaaaagcagatatacagaggcaaaagaaaaaggtggactcctctgtgacctg
gtcttagagcaagataatcaccatctgaattccagaagccctgttcatgtttggggatat
tttttcgtctgcatggaatcagaaagaaaccaaaggatgggaaatgcctgcattcccctg
aaaagaattgcttatttcctatgtctcttatctgcgcttttgctgactgaggggaagaaa
ccagcgaagtcaaaatgccctgccgtgtgtacttgtaccaaagataatgctttatgtgag
aatgccagatccattccacgcaccgttcctcctgatgttatctcattatcctttgtgaga
tctggttttactgaaatctctgaagggagttttttattcacaccatcgctgcagctcttg
ttattcacatccaactcctttgatgtgatcagtgatgatgcttttattggccttccacat
ctagagtatttattcattgaaaacaacaacatcaagacaatttccagacataccttcaga
ggtctaaagtctttaattcacctgagcctcgcaaacaataatctgcaaacacttccaaaa
gacatctttaagggcctggattccttaaccaatgtagacctaagaggaaattcatttaac
tgtgactgtaaactgaagtggctggtggaatggttaagccacaccaatgcaactgttgaa
gacatctattgtgaaggtcctccagaatataaaaagcgcaaaatcaatagcctctctccc
aaggattttgattgtatcattacagaatttgcaaagtctcaagacctgccttatcaatca
ctgtccatagatactttttcttatatgaatgatgagtatgtagtcattgctcagcctttt
actggaaagtgcattttccttgaatgggaccatgtagagaagaccttccggaattatgac
aacattacaggcacgtccactgtagtgtgcaagcctatagtcattgaaactcaactctat
gtaattgtggcgcaactgtttggaggctctcacatctataagagagacagttttgcaaac
aaattcattaaaatccaagatattgaaattctcaaaattcgaaaaccaaatgacattgag
acattcaagattgaaaacaactggtactttgtggttgctgacagttcaaaagctggtttt
acgaccatttacaaatggaatggaaatggattctactcccatcagtcattacatgcatgg
tacagggacaccgatgtggaatatctagaaatagccagaacacctcagacactgagaatg
cctcatttaatcctatctagtagctcccaacgtcctgtaatttatcaatggaacaaagca
acacaattattcatgaaccaaactgacatccctaacatggaggacgtatatgctgtaaag
cacttctcggtgaaaggtgatgtgtacatttgcttgacaagattcattggtgattccaaa
gtaatgaaatggggaggctcctcctttcaagatattcagaggatgccatcaagaggatcc
atggtgtttcagcctcttcagataaataactatcaatatgcaattcttggaagtgattat
tcctttactcaagtgtataattgggatgcagagaaagccaaatttgtgaaatttcaggaa
ctaaacgttcaggcaccaagatcatttacccatgtgtccattaataaacgtaattttctt
tttgcttccagttttaagggaaatacacagatttacaaacatgtcatagttgacttaagc
gcatga
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