KEGG   Shewanella eurypsychrophilus: FM038_013235
Entry
FM038_013235      CDS       T07746                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
seur  Shewanella eurypsychrophilus
Pathway
seur01501  beta-Lactam resistance
seur01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:seur00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    FM038_013235
   01503 Cationic antimicrobial peptide (CAMP) resistance
    FM038_013235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:seur03036]
    FM038_013235
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:seur02000]
    FM038_013235
   01504 Antimicrobial resistance genes [BR:seur01504]
    FM038_013235
Chromosome and associated proteins [BR:seur03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    FM038_013235
Transporters [BR:seur02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   FM038_013235
Antimicrobial resistance genes [BR:seur01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    FM038_013235
SSDB
Motif
Pfam: Beta-barrel_RND_2 YknX_C BSH_RND RND-MFP_C Beta-barrel_RND BSH_CzcB CzcB_C BSH_LcnD HH_EMRA HH_MFP_RND
Other DBs
NCBI-ProteinID: QPG58304
UniProt: A0ABX6V8Y7
LinkDB
Position
complement(3116508..3117593)
AA seq 361 aa
MKKIIILLIFLSLSWVVYQQSSPEKALSKPKARPTPNVVVAKASIEPVRDEVEALGTTKA
NESITVTPKVTEVATFINFDDGDLVKKGRLLVQLQDREQVARVKVAKVRVSDHMRELDRI
RSLVTSQTIAELERDRLQTLIDTAKAELEQSQSALTDRKIMAPFDGRLGLRQISVGSLLT
PGTIITTLDDISVIKLDFSVPERFLQSLEVGKSVEASAVAFPGEMFKGKVVSIDSRINPT
TRAVIVRAEIANPQSRLLPGMLMKVTLIKESREALILPESAIIPIQDRHYVYLVNDEGVI
ERKEVQLGIRKRGWVEIIEGVNLGEEVVIRGILKVRPGDKVKVQYSERFSFLKEAKVRPT
V
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaaaaaaataataatattattaatctttttgtcactctcttgggttgtttatcaacag
agctcaccagaaaaagccttatctaagcctaaagctcgacccactccaaacgtagtcgtt
gctaaagcgagtattgaacctgtgcgtgatgaagtagaagctcttggcacaactaaagct
aatgaatcgattacggtgacgcctaaagtgaccgaggtggcaacttttatcaactttgat
gacggtgatttagttaagaaaggacgtttactggttcaacttcaagatcgagagcaagtc
gctagggtaaaagtcgctaaggtgcgtgtttcagatcatatgcgtgagctcgacagaatt
cgctctttagtgaccagccaaaccattgcagaactagaaagagatcgattacaaacgctg
attgataccgccaaagcagagttggaacaatcgcaatcggcattaaccgacagaaaaatc
atggctccgtttgatggtcgccttggtttacgtcagatcagcgtggggagtttgttaact
ccaggaactatcatcaccacattggatgatatttctgttattaagttagacttttcagtg
ccagagcgttttttgcaatctttagaagtgggtaaatcggtagaagcgagtgccgtagca
tttccaggtgagatgtttaaaggcaaagtggtatctatcgatagcagaatcaatccaacg
actcgagccgttattgtgcgcgccgagattgctaacccacagagtagactgttgcccggc
atgctgatgaaggtgacgctgattaaagagagccgtgaagcacttattttgcctgagtca
gccattatccctattcaagatagacattatgtatacctagtcaatgatgaaggtgttatc
gagagaaaagaggttcagctaggaatacgtaagcgaggctgggttgaaattattgagggt
gtcaatttaggcgaagaggttgttattcgcgggattttgaaagtgcgtccaggggataag
gtaaaggtccaatatagtgaacgttttagcttcctcaaagaagctaaggttaggccaaca
gtatga

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