Salmonella enterica subsp. enterica serovar Schwarzengrund: SeSA_A1035
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Entry
SeSA_A1035 CDS
T00743
Symbol
rumB
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumB
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
sew
Salmonella enterica subsp. enterica serovar Schwarzengrund
Brite
KEGG Orthology (KO) [BR:
sew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sew03009
]
SeSA_A1035 (rumB)
Enzymes [BR:
sew01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
SeSA_A1035 (rumB)
Ribosome biogenesis [BR:
sew03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SeSA_A1035 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
Methyltransf_12
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
ACF89432
UniProt:
B4TRN5
LinkDB
All DBs
Position
1006242..1007369
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AA seq
375 aa
AA seq
DB search
MQCALYDAGRCRSCQWITQSVNEQLSAKTADLHRLLTGLPVEQWCASIGGPEQHFRNKAK
MVVSGSVEKPLFGMLHRDGTPVDLCGCPLYPASFAPVFSALKPFIARAGLTPYNVARKRG
ELKYLLLTESQFDGGMMLRFVLRSETKLTQLRAALPWLRAQLPQLRVITANIQPVHMAIM
EGETEIYLTDQQALAERFNDVPLWIRPQSFFQTNPTVASRLYATARDWVGQLPVRHMWDL
FCGVGGFGLHCATPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGET
PDLVLVNPPRRGIGKPLCDYLAQMAPRFIIYSSCNAQTMAQDIRHLPNYRIQSVQLFDMF
PHTAHYEVLTLLCRL
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcgcactctatgacgcgggtcgctgccgttcctgtcaatggattacgcagtcg
gttaatgaacaactttccgcaaaaacagccgatttacatcgtttgctgaccgggctgcct
gttgaacagtggtgcgcgtcgattggcggcccggaacagcatttccgcaacaaagcgaaa
atggtcgtgagcggtagtgtagaaaaaccgctcttcgggatgctgcatcgcgacggtacg
ccagtcgatctttgcggctgcccgctgtatcccgcctcctttgcccccgtattcagcgcg
ctaaaaccttttattgcccgtgccggactcacgccttataacgtggcgcgaaaacgtggc
gaactgaaatacctgttgctgacggaaagtcagttcgatggcggcatgatgctacgcttc
gtgttgcgttcagaaaccaaacttacgcaacttcgcgcagcgttaccgtggctgcgtgcg
caactgccgcagctcagggtgatcaccgcaaatattcagccggtacatatggcgattatg
gaaggggagacggaaatctatctgacggatcagcaggcgctggcggaacgttttaacgat
gtgccgctgtggattcgtccgcaaagtttctttcagaccaaccctacggtcgccagccga
ttatatgcaacggcgcgcgattgggtagggcaactgccggtacgccatatgtgggatctt
ttttgcggagtgggcggattcggcctgcactgcgcgacgccgcagatgcaattaaccggt
attgagatcgcgccggaggcgattgcctgcgcgaagcaatccgctgccgagctgggattg
acccgccttcatttccaggcgttggattccacccaattcgccaccgcacaaggcgaaacg
cccgacctggtgttggtgaatcctccccgccgtggcattggcaagccgttgtgcgattac
cttgcacaaatggcgccgcgttttattatttattcaagctgtaacgcgcagacgatggcg
caggatattcgccatctgccgaactaccgtattcaaagtgttcagcttttcgatatgttc
ccgcataccgcgcattatgaagtgttaacattgctttgcaggctgtag
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