Streptococcus equi subsp. zooepidemicus MGCS10565: Sez_0784
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Entry
Sez_0784 CDS
T00746
Symbol
ligA
Name
(GenBank) DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
sez
Streptococcus equi subsp. zooepidemicus MGCS10565
Pathway
sez03030
DNA replication
sez03410
Base excision repair
sez03420
Nucleotide excision repair
sez03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sez_0784 (ligA)
03410 Base excision repair
Sez_0784 (ligA)
03420 Nucleotide excision repair
Sez_0784 (ligA)
03430 Mismatch repair
Sez_0784 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sez03032
]
Sez_0784 (ligA)
03400 DNA repair and recombination proteins [BR:
sez03400
]
Sez_0784 (ligA)
Enzymes [BR:
sez01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Sez_0784 (ligA)
DNA replication proteins [BR:
sez03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Sez_0784 (ligA)
DNA repair and recombination proteins [BR:
sez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Sez_0784 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sez_0784 (ligA)
MMR (mismatch excision repair)
DNA ligase
Sez_0784 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Sez_0784 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
5_3_exonuc
UPF0758_N
RTT107_BRCT_5
Motif
Other DBs
NCBI-ProteinID:
ACG62144
UniProt:
B4U2C7
LinkDB
All DBs
Position
813022..814980
Genome browser
AA seq
652 aa
AA seq
DB search
MKKRIRELTDLLNQYRQEYYTNDAPSVSDSEYDKLYRELVELEQTYPAYILKDSPTQLVG
GTILTGFQKYQHQYPLFSLQDAFSREELNAFDQRIKSAFPEAEYLAELKIDGLSISLVYE
AGILKVGATRGDGTIGENITENIKNIKDIPKRLSQALDVTIRGEAYMSRKAFKTINEERQ
ENGEPEFANPRNAAAGTLRQLDTRIVAKRQLATFLYQEVGLEAADSQQRTLERLADLGFS
VNSHYLLSSSMNDIWDFIQSIEATREELPYEIDGVVVKVNQLAIQEELGFTVKAPRWAIA
YKFPAEEKEAEIVSVDWTVGRTGVVTPTANLTPVQLAGTTVSRATLHNVDYIAEKDIRIG
DTVVVYKAGDIIPAVLRVVEAKRSNQTPMPIPTACPSCQSQLVHFEDEVALRCINPLCPS
LIQRSLEHFASRQAMNIAGLGPAVVEKLYSAGLVHDVTDIYRLSLEDLLMLDGIKEKSAE
KLLAAIEQSKANSAEKLLFGLGIRHIGAKASRLILETYGDLETLLSVTAEELAQIDGLGL
VIGQSLVQYFQQDQATQLLAELKSAGVNLAYLGQRPDRQAELFGLTVVLTGKLEKLNRTQ
AKEKLEQLGAKVTGSVSKKTDLVVAGSEAGSKLAKAQQLGIRIEDEDWLLNL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacgcataagagaattgactgatctgttaaatcaataccgtcaggagtattac
accaatgacgctccttctgtatctgatagtgagtatgataagctttatcgtgagcttgta
gagctggagcagacctatccagcctatatcctaaaggacagccccacacagctggtgggc
ggtacgattttgacaggatttcagaaatatcagcaccagtatccgctctttagtttgcag
gatgctttttcacgtgaagagcttaacgcctttgatcagcggatcaaatcagcctttcct
gaggctgaataccttgctgagctaaaaattgatggcttatccatttcattggtttatgag
gctggtattttaaaagttggagcgacgcgtggcgatgggactattggcgagaatatcact
gaaaacattaagaatattaaggatattcccaaacggctaagtcaagcacttgatgtgacg
atacgaggagaggcctatatgtcgcgcaaggcctttaagacgatcaatgaagagcgtcag
gaaaatggtgagccagaatttgccaatccaagaaatgcagcggcaggaacgttgcggcag
ctggatactaggattgttgccaagcgacagctagcgacctttttgtatcaggaggtaggc
ttagaggctgctgatagccagcaaaggaccttggagcgcttggctgatttaggcttttcg
gtcaatagccactatctgctgtcctcatcgatgaatgacatttgggactttatccagagc
attgaagccactagagaagagctaccctatgagattgatggtgtggtggtcaaggttaat
cagttggcgattcaagaggagcttggctttaccgtcaaggcaccacgctgggctattgct
tataagtttccagcagaagaaaaggaagctgagattgtatctgtggattggacggttggc
cgaacaggtgtggtcacaccaacagctaatttgacccctgtgcagctggcaggcaccact
gtcagtcgagcgaccttgcataatgttgattatatcgcagaaaaggatattcgcattggg
gatacggtggtggtgtataaggctggagatattattccggctgtcttacgagtggttgag
gcaaagcgcagcaatcagactccaatgcctattcctacagcctgtccttcttgtcagagt
cagctagtgcattttgaggacgaggtagctctgcgctgtattaatcctttgtgcccaagc
cttattcagcggagcttggagcattttgccagtcgtcaggcgatgaatatcgctggtctt
ggtccagcggttgttgaaaagctttattctgctggcctggtgcatgatgtgacagatatt
taccgactaagcttggaggatttgctgatgctagatggtatcaaggaaaagtcggctgaa
aagctcttggcagctattgaacaatcaaaggcaaactcagctgaaaagctcttgtttgga
cttggtattcgtcacattggagcaaaagccagtcgcttgatattagaaacctatggtgat
ttggagaccttgttaagcgtgactgctgaggagctagcgcaaattgatggacttggtctg
gtcattgggcaatcgctggtgcagtattttcagcaggatcaagcaactcagctcttagct
gaattaaagtcggcaggtgttaatctggcttatttgggccaaagacctgatcggcaggct
gagctttttggactcacagtagtattgacaggaaaattagaaaaactcaaccgtactcaa
gccaaggaaaagctagagcagcttggtgctaaggtaacaggaagcgtttctaaaaaaaca
gatttagttgttgctggcagcgaggcaggctctaagctggctaaggcccagcagctgggt
atcagaattgaagatgaggattggttgctcaatctttag
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integrated database retrieval system
