Sinorhizobium fredii USDA 257: USDA257_c13300
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Entry
USDA257_c13300 CDS
T02188
Symbol
sigB
Name
(GenBank) sigma factor SigB regulation protein rsbU
KO
K07315
phosphoserine phosphatase RsbU/P [EC:
3.1.3.3
]
Organism
sfd
Sinorhizobium fredii USDA 257
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfd03021
]
USDA257_c13300 (sigB)
Enzymes [BR:
sfd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.3 phosphoserine phosphatase
USDA257_c13300 (sigB)
Transcription machinery [BR:
sfd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
USDA257_c13300 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIIE
HAMP
dCache_1
MCP-like_PDC_1
FlgK_D1
Motif
Other DBs
NCBI-ProteinID:
AFL49921
UniProt:
I3X215
LinkDB
All DBs
Position
1410329..1412689
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AA seq
786 aa
AA seq
DB search
MKPFDQGTTRLGLRSFRAKFILVVGGAVLFDLLVTGGLALWNVQRLSRDATAQVGQGLEQ
ANQDYIRSYAETTAARVNLLLNQVHSDVGTLAGVLQAQIDRPVRKSQIGEAMARGAPGTV
TVTYDEKGGWAQNRPGPLSVVSVWGYLLDANHAPLPEVQTDIENSAVLDLVAPSLLANGQ
SKLQMYYIGPKERPIFRTAPYTDQAQTFDRLYPGHNQAEFWPFFFPGLYESWEQWAKNPA
SRPVNSDITQTAPYTDAITGKLIVSFFQPLWSRDRDRVAGAAGADITLDQLAEIVENVRV
ADNGFGFLTMSDGNVVAINPVGEKVIGLQSSSDTSSQGVTGLDRSLRNSAQAAIAKLPLD
QDGLLQHVLLDENGEKVPYLVVLKQLQPSNLWVSGPVRRESMLLGVVVPEREIYASLFAA
QAGITKATNRILIYQVLALLVSLLFVTSAVFAISKRITGGISALADAARRIQTKDYSVRV
DIPTRDEVGEAGAAFNRMAEQISYHTENLEQLVEDRTKEIEEANLQISALNEQLRSENVR
LGAELDVARRIQMMVLPKAAELEEIANLDIAAYMRPADEVGGDYYDVLRDGERLKIGIGD
VTGHGLESGVLMLMVQSVARALQEAGDMDPSQFLNRVNRALYKNIVRTNANKHLSLAFLD
YDGTRLMLSGQHEELIVVRGAGSVERIDTLDLGLPIGLEPDISPFVATQEVAFAQGDMVI
LHTDGVTEAEGPNGELFGIERLCESARRRHGQSAEDVKAGILEDLMAHIGTQKIHDDITV
VVMRHR
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgttcgaccaagggaccacccgcctcgggttgcgctcgttccgcgccaagttc
atccttgtcgtcggcggggccgtgctcttcgatctgctcgtcaccggcggccttgcgctc
tggaacgtgcagaggctttcgcgcgacgcgaccgcacaggtcggccaagggctggagcag
gccaatcaggactacatccgttcctatgcggaaacgacggctgctcgcgtcaacctgctt
ctcaaccaggtgcactccgacgtcggcacgctggcgggcgtgctccaggcgcagatcgac
cgtcccgtcaggaagtcccagatcggcgaagcgatggcacggggcgcccccggcaccgtg
accgtcacctatgacgaaaaaggcggatgggcccagaaccggccgggccccctttcggtc
gtcagcgtctggggatatctgctcgatgccaaccacgcccccttgccagaggtccagacg
gacattgagaacagcgcggtccttgacctggtcgctccgagcctgctggccaacggtcaa
tccaagctgcagatgtactatatcggcccgaaggagcggccgatcttccgaacggccccc
tatacggatcaggcccagacattcgaccgcttgtatcccggtcataaccaggccgagttc
tggccgttttttttccccggtctctacgaatcgtgggagcaatgggccaagaaccccgcg
tctcgtccggtgaacagcgacatcacgcagacggcgccctatacggatgcgatcaccggc
aagctgatcgtcagcttcttccagcccttgtggtcgcgcgaccgtgaccgggtagccggt
gccgcaggcgccgatatcaccctcgaccaactggcagagatcgtcgagaacgtccgggtc
gccgacaatggcttcggcttcctcaccatgtcagacggcaatgtcgtcgccatcaacccg
gtcggcgaaaaggtgatcggcctccagtcgtcgagcgacaccagcagccagggggtgacg
ggtctcgatcgctcgctgcgcaacagcgcacaagccgcaatcgccaagttgccgctggat
caggacggcctgttgcagcatgtcctgctcgatgaaaacggcgagaaggtgccctatctc
gtcgtcctgaaacagctgcagccgtcgaacttgtgggtctccggcccagttcgtcgtgaa
tcaatgttgctcggcgtcgtcgtgccggagcgtgaaatctacgcttcgctcttcgccgcg
caggccggcattacgaaagcgacgaacaggatcctgatctaccaggtcctggcgctgctc
gtgtcgctgctcttcgtcacctcggccgttttcgccatatcgaagcgcatcaccggcggc
atcagcgcgctcgccgacgcggcccggcgcatccagaccaaggactattccgtccgggtg
gatattccgacgcgcgacgaagtaggggaagcgggcgccgccttcaaccgcatggccgag
cagatcagctaccataccgagaatctggagcagcttgtcgaggaccggacgaaggagatc
gaagaggcaaacctgcagatctcggcgctcaacgagcagttgcgcagcgagaacgtgcgc
ctcggcgccgagctggacgtcgcccgccgaatccagatgatggtcctgccgaaagcggct
gaactcgaggaaattgccaacctcgatattgccgcctacatgcggcccgccgacgaagtc
ggtggcgactattatgacgtgctgagggacggagagcggctgaagatcggcatcggcgac
gtgaccggtcacggcctggaaagcggcgtcctgatgttgatggttcaatcggtggcccgc
gcgttgcaggaggccggcgacatggatccgtcgcagttcctcaaccgggtgaaccgcgcc
ctttacaagaacatcgtcagaaccaacgcgaacaaacatctctcccttgccttcctggac
tatgacggaacccgtctgatgctttccggccagcatgaggaactgatcgtggtgcggggc
gccgggagcgtcgagcggatcgacacgctcgacctcggcctgccgattggcttggagcct
gatatctcgcccttcgtagcaacccaggaggtcgcctttgcccaaggcgacatggtcatt
ctccacactgacggcgtgaccgaggcggaggggccgaacggagagctcttcggtatcgag
aggctttgcgaaagcgctcgtcgtcgccacggccagagcgctgaggacgtcaaagcggga
attctcgaggatctgatggcgcatatcggcacacagaagatccacgatgatataacagtc
gtagtgatgagacacaggtag
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