Sinorhizobium fredii USDA 257: USDA257_c35190
Help
Entry
USDA257_c35190 CDS
T02188
Symbol
metC
Name
(GenBank) putative cystathionine beta-lyase MetC
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00270
Cysteine and methionine metabolism
sfd00450
Selenocompound metabolism
sfd01100
Metabolic pathways
sfd01110
Biosynthesis of secondary metabolites
sfd01230
Biosynthesis of amino acids
Module
sfd_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
USDA257_c35190 (metC)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
USDA257_c35190 (metC)
Enzymes [BR:
sfd01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
USDA257_c35190 (metC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
DUF2378
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AFL52078
UniProt:
I3X872
LinkDB
All DBs
Position
3680978..3682165
Genome browser
AA seq
395 aa
AA seq
DB search
MADKMSARGEIGINTRLAHTGNNPLDYHGFVNPPVVHASTVLFPNAKTMETRAQKYTYGT
RGTPTTDALCDAINELERAAGTILVPSGLAAVTVPFFAYLSSGDHALIVDSVYFPTRHFC
DTMLTRLGVTVEYYDPMIGAAIENLIRPNTRLVHTEAPGSNTFEMQDIRAIADAAHRHGC
VVTMDNTWATPLYFRPLDHGVDVSIHAATKYPSGHSDVLLGTVSANAVHWPALTEAMVTL
GVCVSPDDSYQILRGLRTMGIRLERHQESALALARWLESREEVARVLHPALPSFPGHELW
KRDFGGASGIFSFVLKAEPETSKAKAHAFLDALSFFGLGYSWGGFESLALHANLSDRKVA
KAPDGGPVIRLQIGLEDVADLRRDIEAGLAAANAV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaaatgagcgcgcgcggagagatcggcatcaacacccgcctcgcgcacacc
ggcaacaatcctttggactaccatggattcgtcaatccgccggtggtccacgcgtccacc
gtgcttttcccgaacgcgaaaaccatggaaacgcgggcgcagaaatacacctacggcacg
cgcggcacgccgacgaccgatgcgctctgcgacgcaatcaacgaactcgagcgagcggcc
ggaacgattctcgtcccctcgggcctggccgcggtcacggtgcccttcttcgcctatctc
tcctcgggcgatcacgccctgatcgtcgattcggtctatttcccgacccggcacttctgc
gacacgatgctgacccggcttggcgtcacagtcgaatattacgatccaatgatcggtgct
gctattgaaaacctgatcaggccgaacacgcggctggtgcacacggaggcaccgggctcg
aacaccttcgagatgcaggatatccgggcgatcgccgatgccgcccaccgccacggttgt
gtcgtcactatggacaacacctgggcaacgccgctctacttccgccccctcgaccacggc
gtcgacgtttccatccacgcggcgacgaaatacccgtctgggcactcggacgtgctgctc
ggaaccgtttcggccaacgcggtacattggccggccttgacggaggcgatggtgacgctt
ggtgtctgcgtctcgccggacgacagctatcagatcctgcgcggcctgcggaccatgggc
atacgcctcgagcgccaccaggaaagcgcgctggcgctcgcccgttggctcgaaagccgc
gaagaggtggcgcgcgtgctgcatccggcgctcccaagctttcccgggcacgagctctgg
aagcgcgactttggcggggcgagcggcattttctcatttgtgctgaaggccgaacccgaa
acaagcaaggcgaaggcgcatgccttcctcgatgcgctctcgttcttcggcctcggttat
tcctggggcggattcgaaagcctcgcgctgcatgcgaacctttccgatcgcaaggtcgcc
aaggccccggacggaggtccggtcattcgactgcagatcggcctcgaagatgttgccgac
ctgcgccgcgacatcgaggcaggtctcgcggcggccaatgcggtctga
DBGET
integrated database retrieval system
