Serratia ficaria: SAMEA4384070_1702
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Entry
SAMEA4384070_1702 CDS
T06444
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfj03009
]
SAMEA4384070_1702 (rlmC)
Enzymes [BR:
sfj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
SAMEA4384070_1702 (rlmC)
Ribosome biogenesis [BR:
sfj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SAMEA4384070_1702 (rlmC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_12
Methyltransf_15
Methyltransf_ANTKMT
Methyltransf_11
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
SNV98167
UniProt:
A0A240BQM0
LinkDB
All DBs
Position
1:1788804..1789931
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AA seq
375 aa
AA seq
DB search
MHCALYTAGTCRSCQWLDKPYPQQLTDKQQHLQSLLAERDVAQWRAPVAGEQSAFRNKAK
MVVSGSVERPLLGMLHRDGTPADLSACPLYPASFAPMFAALKSFIARAGLTPYNVARKRG
ELKYLLLTESTHGGGVMLRFVLRSETKLAQLRAALPWLQQQLPQLRVISANIQPVHMAIM
EGEREIALTDRQALEERFNQVPLYIRPQSFFQTNPQVAASLYATARDWVRALGIDSMWDL
FCGVGGFGLHCAQPQTRLTGIEISAEAIACARQSAQRLGLRQVDFQALDSTRFATAEGHV
PQLVLVNPPRRGIGQALCDYLNRMAPGYILYSSCNAESMAKDIAMLPDYRIERVQLFDMF
PHTAHYEVLTLLVRN
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgctttgtatacggcgggcacctgccgttcctgtcagtggctggacaagccg
tacccgcagcaactgactgacaaacagcaacatctgcaatcgctgctggccgagcgcgac
gtcgcgcaatggcgggcgccggtggcgggggagcaaagcgcgtttcgcaataaagccaag
atggtggtcagcggcagcgttgaacgcccgctgctcggtatgctgcaccgcgacggcacg
ccggccgatctcagcgcctgcccgctgtatcccgccagcttcgcgccgatgtttgcggcg
ctgaaaagctttatcgcccgcgccggcctgacgccctataacgtggcgcgcaaacgcggc
gagctgaaatacctgctgttgaccgaaagcacccatggcggcggcgtgatgctgcgtttc
gtgctgcgttcggaaaccaagctggcgcagctgcgcgccgcgctgccgtggctgcagcag
caattgccgcagctccgggtgatctccgccaatattcagccggtgcacatggccatcatg
gaaggggagcgcgagatcgcgctgaccgaccggcaggcgctggaggaacggtttaatcag
gtgccgctgtatatccgcccgcagagctttttccagaccaacccgcaggtggccgccagc
ctgtacgctaccgcccgtgattgggtgcgggcgctgggcatcgacagcatgtgggatctg
ttctgcggcgtcggcggttttggcctgcactgcgcgcagccgcaaacccgccttaccggc
atcgaaatcagcgccgaggcgattgcctgcgcgcgccagtcggcgcagcggctgggcctg
cggcaggtcgattttcaggcgctggactcgacgcgtttcgccaccgccgaaggccatgtg
ccgcagctggtgctggtcaatccgccgcgccgcggcatcggccaggcgctgtgcgattat
ctgaatcggatggcgccgggctacatcctgtattccagctgcaacgccgagagcatggcg
aaagacatcgcaatgctgccggattaccgcatcgagcgggtacagctgttcgacatgttc
ccgcataccgcgcactatgaagtgctgacgctgctggtgcgaaactga
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