Serratia ficaria: SAMEA4384070_2303
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Entry
SAMEA4384070_2303 CDS
T06444
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sfj
Serratia ficaria
Pathway
sfj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMEA4384070_2303 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfj03400
]
SAMEA4384070_2303 (nth)
Enzymes [BR:
sfj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SAMEA4384070_2303 (nth)
DNA repair and recombination proteins [BR:
sfj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SAMEA4384070_2303 (nth)
Prokaryotic type
SAMEA4384070_2303 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
SNW01030
UniProt:
A0A240BZC9
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All DBs
Position
1:complement(2421477..2422118)
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AA seq
213 aa
AA seq
DB search
MNKQKRLEILTRLRDNNPHPTTELVYTTPFELLIAVLLSAQATDVSVNKATAKLYPVANT
PAAMLALGVDGVKEYIKTIGLFNSKAENVIKTCRMLLELHGGEVPEDRAALEALPGVGRK
TANVVLNTAFGWATIAVDTHIFRVCNRTRFAPGKNVDLVEEKLLKVVPAEFKVDCHHWLI
LHGRYTCIARKPRCGSCIIEDLCEFNEKVYPDA
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaaaaacgactggaaattctcacccgcctgcgggacaacaacccgcacccg
actaccgaactggtgtacaccacgccgtttgagttgctgatcgcggtgctgctctccgcg
caggccaccgacgtcagcgtcaacaaggccaccgcgaagctctatccggtcgccaacacc
cccgccgccatgctggcgctgggcgtcgacggcgtgaaggaatacatcaagactatcggc
ctgttcaacagcaaggccgagaacgtcattaaaacctgccgcatgctgctggagctgcac
ggcggtgaagtgccggaagaccgcgccgcgctggaagcgctgccgggggtgggccgcaaa
accgccaacgtggtgctcaacaccgcctttggctgggcgaccatcgccgtggatacccat
atctttcgggtgtgcaaccgcacgcgcttcgcgccgggcaagaacgtcgatctggtggag
gagaagctgctgaaagtggtgcccgccgagttcaaggtcgactgccaccactggctgatc
ctgcacggccgctatacctgcatcgcgagaaaaccgcgttgcggctcctgcattatcgaa
gacctgtgcgagtttaacgagaaggtttaccccgacgcctga
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