Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_02429
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Entry
SPHFLASMR4Y_02429 CDS
T04949
Symbol
capD
Name
(GenBank) UDP-glucose 4-epimerase
KO
K15894
UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:
4.2.1.115
5.1.3.-]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla00541
Biosynthesis of various nucleotide sugars
sfla01100
Metabolic pathways
sfla01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SPHFLASMR4Y_02429 (capD)
Enzymes [BR:
sfla01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.115 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-inverting)
SPHFLASMR4Y_02429 (capD)
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Motif
Pfam:
Polysacc_synt_2
Epimerase
Polysacc_syn_2C
3Beta_HSD
NAD_binding_10
GDP_Man_Dehyd
NmrA
NAD_binding_4
RmlD_sub_bind
KR
adh_short
F420_oxidored
Sacchrp_dh_NADP
NAD_Gly3P_dh_N
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
ASK89170
UniProt:
A0A220W8K9
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Position
complement(2480600..2481634)
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AA seq
344 aa
AA seq
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MLDDVCLMITGGTGSFGNAVVRRFLDSNVREIRIFSRDEKKQDDMRKLYRNDKLKFFLGD
VRSRDSLSDAMHGVDFVFHAAALKQVPSCEFFPLEAVNTNVLGTANAIDAAHRAGVRRMI
CLSTDKAVYPINAMGTSKAMMEKVATGKARAIDPERMTICCTRYGNVMASRGSVIPLFVR
QIQAGEPLTITDPDMTRFMMTLDHAVDLVLFGYEQGVTGDVLVQKAPAATIHILAKALLE
LFEKPDHPINILGTRHGEKKHETLLSREELAQSVDLGEYYRVPADMRDLNYGVYVESGES
RISESFDYTSENTQQLDVEGMKDLLLQLPFIRSTLAGEPADSEV
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgttagatgatgtttgcctgatgatcaccggcggcaccggcagttttggcaatgccgtg
gtgcggcgctttctggacagcaatgtccgcgaaatccgcatcttcagccgcgacgagaag
aagcaggacgatatgcgcaagctgtatcgcaacgacaagctcaaattcttcctcggcgac
gtgcgcagccgtgacagcctgtccgatgccatgcacggcgtcgatttcgtgtttcacgcc
gccgcgctgaagcaggttccgtcctgcgaattctttccgctcgaggccgtgaacaccaat
gtccttggcaccgccaacgcgatcgatgcggcgcaccgcgccggcgtcaggcggatgatc
tgcctgtccaccgacaaggcggtctacccgatcaatgcgatgggcacctccaaggcaatg
atggaaaaggtcgcgaccggcaaggcccgcgcgattgatccggaacggatgaccatctgc
tgcacccgctatggcaatgtcatggcctcgcgcggctcggtcatcccgctgttcgtgcgc
cagatccaggcgggcgagccgctgacgatcaccgaccctgacatgacccgcttcatgatg
acgctggaccatgccgtcgatctggtgctgttcggctatgagcagggcgtgaccggtgat
gttctggtgcaaaaggcgccggccgcgaccatccacatcctcgccaaggcgctgctcgag
ttgtttgaaaagcccgaccatccgataaacattctcggcacgcgccatggcgagaagaag
cacgagaccctgctttcgcgcgaagaactggcgcaatcggtggatctcggcgaatattac
cgggtgccggccgacatgcgcgacctgaattacggcgtctatgtcgaatcgggggaaagc
cggatcagcgaatcctttgactatacgtcggaaaacacgcaacagcttgatgtcgagggc
atgaaagacctgctgctgcagcttcctttcatccgttccacactggccggtgaaccggca
gattccgaggtttga
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