Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_02727
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Entry
SPHFLASMR4Y_02727 CDS
T04949
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPHFLASMR4Y_02727 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfla03400
]
SPHFLASMR4Y_02727 (nth)
Enzymes [BR:
sfla01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SPHFLASMR4Y_02727 (nth)
DNA repair and recombination proteins [BR:
sfla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SPHFLASMR4Y_02727 (nth)
Prokaryotic type
SPHFLASMR4Y_02727 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ASK89464
UniProt:
A0A220W9I3
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All DBs
Position
complement(2800990..2801661)
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AA seq
223 aa
AA seq
DB search
MTARMKKADIFEFYSRLAADNPAPETELNYGNVYQLVVAVALSAQSTDIGVNKATRRLFA
EVTTPQQMVDLGLDGLKEHIKTIGLYNTKAKNVIALSEMLIADYGGEVPADRDALVKLPG
VGRKTANVVMNCAFGAETFAVDTHIFRVGNRTGLAPGKTVLAVEKKLEKQTPAPFRVHAH
HWLILHGRYICKARKPECWRCPVADLCRFKKKTPAPDGWTGTS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgcgcatgaaaaaagccgatatcttcgaattctattcccgcctcgccgccgac
aatccggcgccggagaccgagctcaactatggcaatgtctaccagctggtggtcgccgtg
gcgctgtcggcgcaatcgaccgatatcggcgtcaacaaggcgacccggcgcctgttcgcc
gaagtcacaacgccgcagcagatggtcgatctcgggctcgacgggctgaaggagcatatc
aagacgatcggcctctataataccaaggcgaaaaatgtcatcgcgctgtcggagatgctg
atcgccgactatggcggcgaggtcccggcggatcgcgacgcgctggtcaagctgcccggc
gtcgggcgcaagaccgccaatgtcgtgatgaactgtgccttcggtgccgaaaccttcgcg
gtcgacacgcatattttccgggtcggcaaccgcaccggcctggcgccgggcaagacggtg
ctggcggtggagaaaaagctggagaagcagacccctgccccgttccgcgtccacgcccat
cactggctgattctgcacggccgctatatctgcaaggcgcgcaagccggaatgttggcgc
tgcccggttgccgacctgtgccggttcaagaagaagacaccggcgccggacggctggacc
ggcacgtcctag
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